RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 PARLQ9H300 379 aa4.74□□□□□ -1.65
HCFC2-204ENST00000550335 ZDHHC18Q9NUE0 388 aa4.74□□□□□ -1.65
HCFC2-204ENST00000550335 DCAF16Q9NXF7 216 aa4.74□□□□□ -1.65
HCFC2-204ENST00000550335 RCOR3Q9P2K3 495 aaPredicted RBP4.74□□□□□ -1.65
HCFC2-204ENST00000550335 RNF6Q9Y252 685 aa4.74□□□□□ -1.65
HCFC2-204ENST00000550335 WDR45Q9Y484 360 aa4.74□□□□□ -1.65
HCFC2-204ENST00000550335 TNFRSF18Q9Y5U5 241 aa4.74□□□□□ -1.65
HCFC2-204ENST00000550335 CFAP65Q6ZU64 1925 aaKnown RBP4.74□□□□□ -1.65
HCFC2-204ENST00000550335 PTCH1Q13635 1447 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 ADAMTS13Q76LX8 1427 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 ATP10DQ9P241 1426 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 FER1L5A0AVI2 2057 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 SPHKAPQ2M3C7 1700 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 MEX3AA1L020 520 aaKnown RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 K7EQG2 157 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 PDLIM1O00151 329 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 ZSCAN12O43309 604 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 SNAP91O60641 907 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 SNNO75324 88 aaPredicted RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 FRAT2O75474 233 aaPredicted RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 SURF6O75683 361 aaKnown RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 ZFAND5O76080 213 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 HOXB7P09629 217 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 TAGLN2P37802 199 aaKnown RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 POU3F4P49335 361 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 PLA2G16P53816 162 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 RGS1Q08116 209 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 TMEM44Q2T9K0 475 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 PYHIN1Q6K0P9 492 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 TMEM17Q86X19 198 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 LRRC43Q8N309 656 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 RFESDQ8TAC1 157 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 DNASE2BQ8WZ79 361 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 ST6GALNAC5Q9BVH7 336 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 POLR3FQ9H1D9 316 aaPredicted RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 PNNQ9H307 717 aaKnown RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 BARHL2Q9NY43 387 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 C6orf203Q9P0P8 240 aaPredicted RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 GNG12Q9UBI6 72 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 GSTK1Q9Y2Q3 226 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 EXOSC1Q9Y3B2 195 aaKnown RBP4.73□□□□□ -1.65
HCFC2-204ENST00000550335 ASB3Q9Y575 518 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 MAD1L1Q9Y6D9 718 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 NWD1Q149M9 1564 aa4.73□□□□□ -1.65
HCFC2-204ENST00000550335 GRIN2DO15399 1336 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 CCDC144AA2RUR9 1427 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 MBLAC1A4D2B0 266 aaPredicted RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 CTAGE5O15320 804 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 TYROBPO43914 113 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 XRCC1P18887 633 aaPredicted RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 CALB2P22676 271 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 HMGCLP35914 325 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 PTGER3P43115 390 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 STK19P49842 368 aaPredicted RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 EWSR1Q01844 656 aaKnown RBP eCLIP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 TNFRSF17Q02223 184 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 PLOD1Q02809 727 aaPredicted RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 ZNF85Q03923 595 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 HYAL1Q12794 435 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 SIX1Q15475 284 aaPredicted RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 CELF3Q5SZQ8 465 aaKnown RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 STOX1Q6ZVD7 989 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 SPEM1Q8N4L4 309 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 ANKFN1Q8N957 763 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 STXBP6Q8NFX7 210 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 ZNF671Q8TAW3 534 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 CNDP1Q96KN2 507 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 ZNF597Q96LX8 424 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 PRICKLE1Q96MT3 831 aaPredicted RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 SECISBP2Q96T21 854 aaKnown RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 CHCHD5Q9BSY4 110 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 RBM4Q9BWF3 364 aaKnown RBP4.72□□□□□ -1.65
HCFC2-204ENST00000550335 RAB18Q9NP72 206 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 ABCC13Q9NSE7 274 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 MUTYHQ9UIF7 546 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 NAALAD2Q9Y3Q0 740 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 ANKRD30BQ9BXX2 1392 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 SETBP1Q9Y6X0 1596 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 FAM135BQ49AJ0 1406 aa4.72□□□□□ -1.65
HCFC2-204ENST00000550335 TMEM94Q12767 1356 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 RAB3GAP2Q9H2M9 1393 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 IGLV4-3A0A075B6K6 122 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 NTN3O00634 580 aaPredicted RBP4.71□□□□□ -1.66
HCFC2-204ENST00000550335 LRRTM2O43300 516 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 JCHAINP01591 159 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 ALOX5P09917 674 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 CPN1P15169 458 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 H2AFXP16104 143 aaPredicted RBP4.71□□□□□ -1.66
HCFC2-204ENST00000550335 PCMT1P22061 227 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 RDXP35241 583 aaKnown RBP4.71□□□□□ -1.66
HCFC2-204ENST00000550335 EMDP50402 254 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 PPT1P50897 306 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 ARHGDIAP52565 204 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 ATP12AP54707 1039 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 GSCP56915 257 aaPredicted RBP4.71□□□□□ -1.66
HCFC2-204ENST00000550335 RPS6P62753 249 aaKnown RBP4.71□□□□□ -1.66
HCFC2-204ENST00000550335 ACY1Q03154 408 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 CRMP1Q14194 572 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 ZIC1Q15915 447 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms