RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 COX4I2Q96KJ9 171 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 MARK4Q96L34 752 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 WFIKKN1Q96NZ8 548 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 FAM111AQ96PZ2 611 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 PIGQQ9BRB3 760 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 MED18Q9BUE0 208 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 EBPLQ9BY08 206 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 DSN1Q9H410 356 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 HHATLQ9HCP6 504 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 MYNNQ9NPC7 610 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 MIEF1Q9NQG6 463 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 DDX18Q9NVP1 670 aaKnown RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 KLHL28Q9NXS3 571 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 ADAM21Q9UKJ8 722 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 TIMM22Q9Y584 194 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 AP4B1Q9Y6B7 739 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 FREM3P0C091 2139 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 SONP18583 2426 aaKnown RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 IGLV3-32A0A0A0MS00 114 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 OR2M5A3KFT3 312 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 TTC36A6NLP5 189 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 C17orf51A8MQB3 221 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 H3BML4 177 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 UPK1AO00322 258 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 SEC14L5O43304 696 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 RSL1D1O76021 490 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 JUNP05412 331 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 GCAP28676 217 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 KCNJ5P48544 419 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 SUCLG1P53597 346 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 RPS3AP61247 264 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 PRR5P85299 388 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 BTKQ06187 659 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 C17orf67Q0P5P2 114 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 C2orf80Q0P641 193 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 STX5Q13190 355 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 PON3Q15166 354 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 GUSBP1Q15486 140 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 TMEM44Q2T9K0 475 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 SPDYAQ5MJ70 313 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 SH2D4BQ5SQS7 431 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 FAM71E1Q6IPT2 247 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 TRMT10CQ7L0Y3 403 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 GGNQ86UU5 652 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 CIARTQ8N365 385 aaPredicted RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 POU5F2Q8N7G0 328 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 MNS1Q8NEH6 495 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 FNDC9Q8TBE3 224 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 FIG4Q92562 907 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 HOXB13Q92826 284 aaPredicted RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 GFM2Q969S9 779 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 ELP4Q96EB1 424 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 C1GALT1C1Q96EU7 318 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 PIK3IP1Q96FE7 263 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 METTL2AQ96IZ6 378 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 AMDHD1Q96NU7 426 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 KCNA7Q96RP8 456 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 CCL19Q99731 98 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 LMF2Q9BU23 707 aaKnown RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 BDH2Q9BUT1 245 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 PINK1Q9BXM7 581 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 TBL1XR1Q9BZK7 514 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 OPN3Q9H1Y3 402 aaPredicted RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 GLIPR2Q9H4G4 154 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 GSTO2Q9H4Y5 243 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 UBTD1Q9HAC8 227 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 C3orf14Q9HBI5 128 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 MID1IP1Q9NPA3 183 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 PAQR5Q9NXK6 330 aaPredicted RBP6.85□□□□□ -1.31
NEK3-201ENST00000550331 FLRT3Q9NZU0 649 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 MED11Q9P086 117 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 STOML1Q9UBI4 398 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 PROCRQ9UNN8 238 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 ZNF337Q9Y3M9 751 aa6.85□□□□□ -1.31
NEK3-201ENST00000550331 KIAA1549Q9HCM3 1950 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 A0A087WZY1 265 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 C7orf72A4D263 438 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 NPIPB8E9PQR5 432 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 H0YC42 278 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 UBFD1O14562 309 aaKnown RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 KCNH1O95259 989 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 ANGPTL1O95841 491 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 NGFRP08138 427 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 PPP3CBP16298 524 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 ZNF17P17021 662 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 IL11P20809 199 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 LOXP28300 417 aaPredicted RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 FOXA1P55317 472 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 TPD52P55327 224 aaPredicted RBP6.84□□□□□ -1.31
NEK3-201ENST00000550331 CLDN20P56880 219 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 SIRPAP78324 504 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 SGCBQ16585 318 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 IMPG1Q17R60 797 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 PRSS53Q2L4Q9 553 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 VPS26BQ4G0F5 336 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 FBLN7Q53RD9 439 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 NOXRED1Q6NXP6 359 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 MARCH3Q86UD3 253 aa6.84□□□□□ -1.31
NEK3-201ENST00000550331 ZNF610Q8N9Z0 462 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms