RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 EXOSC7Q15024 291 aaKnown RBP5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 PDGFRLQ15198 375 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 TAF13Q15543 124 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 ZNF425Q6IV72 752 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 TRMT11Q7Z4G4 463 aaKnown RBP5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 MARCH9Q86YJ5 346 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 CCDC65Q8IXS2 484 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 CENPLQ8N0S6 344 aaPredicted RBP5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 ZNF383Q8NA42 475 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 TSTD1Q8NFU3 115 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 SPPL2BQ8TCT7 592 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 PHYHIPQ92561 330 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 MCHR2Q969V1 340 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 TMEM45BQ96B21 275 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 SCRN2Q96FV2 425 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 C8orf76Q96K31 380 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 NEDD4LQ96PU5 975 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 SLC26A1Q9H2B4 701 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 SLC52A3Q9NQ40 469 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 FARSBQ9NSD9 589 aaKnown RBP5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 SMPD3Q9NY59 655 aaPredicted RBP5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 PLEK2Q9NYT0 353 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 EPHA6Q9UF33 1036 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 MMP17Q9ULZ9 603 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 OR1A2Q9Y585 309 aa5.41□□□□□ -1.54
TGFBR1-208ENST00000550253 MUC22E2RYF6 1773 aaPredicted RBP5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 PCNX2A6NKB5 2137 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 ANKRD30BLA7E2S9 258 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 CYSRT1A8MQ03 144 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 TMEM110-MUSTN1A8MSY1 372 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 A8MVM7 634 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 SNURFLB1AK76 121 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 KIF2AO00139 706 aaPredicted RBP5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 PDXKO00764 312 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 MTRF1O75570 445 aaKnown RBP5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 CDK2AP2O75956 126 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 KRT33AO76009 404 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 KLF8O95600 359 aaPredicted RBP5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 SLPIP03973 132 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 EZRP15311 586 aaKnown RBP5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 PAICSP22234 425 aaKnown RBP5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 ACKR3P25106 362 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 SLC1A3P43003 542 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 TAF6P49848 677 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 HERV-K104P61576 105 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 SPIBQ01892 262 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 IL24Q13007 206 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 KEAP1Q14145 624 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 TMEM132DQ14C87 1099 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 SLC36A3Q495N2 470 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 PDSS1Q5T2R2 415 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 LYPLAL1Q5VWZ2 237 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 LIPKQ5VXJ0 399 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 LIPJQ5W064 366 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 TMEM64Q6YI46 380 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 ERASQ7Z444 233 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 ZDHHC21Q8IVQ6 265 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 ZNF843Q8N446 348 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 OR6M1Q8NGM8 313 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 C2orf15Q8WU43 125 aaKnown RBP5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 MARK4Q96L34 752 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 TTC25Q96NG3 672 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 PSD2Q9BQI7 771 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 RHNO1Q9BSD3 238 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 NACA2Q9H009 215 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 VIPAS39Q9H9C1 493 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 ANGPTL3Q9Y5C1 460 aa5.4□□□□□ -1.54
TGFBR1-208ENST00000550253 CFAP46Q8IYW2 2715 aa5.4□□□□□ -1.55
TGFBR1-208ENST00000550253 TP53BP1Q12888 1972 aaPredicted RBP5.4□□□□□ -1.55
TGFBR1-208ENST00000550253 CACNA1EQ15878 2313 aa5.4□□□□□ -1.55
TGFBR1-208ENST00000550253 A0A1W2PS18 150 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 WDR91A4D1P6 747 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 GOLGA6L10A6NI86 522 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 B8ZZF3 427 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 AP3B1O00203 1094 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 MAGEB3O15480 346 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 P2RX6O15547 441 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 ATP8B1O43520 1251 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 AKAP8O43823 692 aaKnown RBP5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 CYTIPO60759 359 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 SAP30O75446 220 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 ACAA1P09110 424 aaPredicted RBP5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 HIST1H2AGP0C0S8 130 aaPredicted RBP5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 CLUP10909 449 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 LIFP15018 202 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 TNNI3P19429 210 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 OTX2P32243 289 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 HOXA1P49639 335 aaPredicted RBP5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 SULT1E1P49888 294 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 UBE2HP62256 183 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 KDSRQ06136 332 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 KIF5AQ12840 1032 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 MEF2DQ14814 521 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 OR1C1Q15619 314 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 ZSWIM7Q19AV6 140 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 ANKRD55Q3KP44 614 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 LRRC37A5PQ49AS3 106 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 MPPE1Q53F39 396 aa5.39□□□□□ -1.55
TGFBR1-208ENST00000550253 CCDC183Q5T5S1 534 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms