RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 NME5P56597 212 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 RPS26P62854 115 aaKnown RBP15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 HSPB2Q16082 182 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 SLC25A35Q3KQZ1 300 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 DCST2Q5T1A1 773 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 APOOLQ6UXV4 268 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 SEM1Q6ZVN7 128 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 MAVSQ7Z434 540 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 MISPQ8IVT2 679 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 ZNF527Q8NB42 609 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 LRRC8CQ8TDW0 803 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 C1GALT1C1Q96EU7 318 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 MAELQ96JY0 434 aaKnown RBP15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 C7orf26Q96N11 449 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 OR7D2Q96RA2 312 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 TRIB1Q96RU8 372 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 FBXO34Q9NWN3 711 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 GPR45Q9Y5Y3 372 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 A0A1W2PQD3 144 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 KDM4EB2RXH2 506 aaPredicted RBP15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 TOXO94900 526 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 SNRPB2P08579 225 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 TIMP3P35625 211 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 B3GALT5-AS1P59052 145 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 UFM1P61960 85 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 SRYQ05066 204 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 GATSQ8NAP1 163 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 OR5D16Q8NGK9 328 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 ZPLD1Q8TCW7 415 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 ACTRT2Q8TDY3 377 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 DYDC1Q8WWB3 177 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 TEX37Q96LM6 180 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 CCDC115Q96NT0 180 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 TUBA1CQ9BQE3 449 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 UCK2Q9BZX2 261 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 SERHL2Q9H4I8 314 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 CALHM2Q9HA72 323 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 FBN2P35556 2912 aa15.61■□□□□ 0.09
CHMP1A-208ENST00000550102 MBD3L4A6NDZ8 208 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 MBD3L3A6NE82 208 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 MBD3L5A6NJ08 208 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 DUXAA6NLW8 204 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 C9JVG2 144 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 LINC01387J3KSC0 135 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 GMFGO60234 142 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 DIAPH2O60879 1101 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 SCN2BO60939 215 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 AK1P00568 194 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 IL2RAP01589 272 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 ZNF708P17019 499 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 POU3F2P20265 443 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 UQCRC2P22695 453 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 MSX1P28360 303 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 CEACAM8P31997 349 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 CLDN18P56856 261 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 PHC1P78364 1004 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 TFF3Q07654 80 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 BCL2A1Q16548 175 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 FLYWCH1Q4VC44 716 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 SLC9B1Q4ZJI4 515 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 MEX3BQ6ZN04 569 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 GDF7Q7Z4P5 450 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 C6orf120Q7Z4R8 191 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 MCEMP1Q8IX19 187 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 CLEC4FQ8N1N0 589 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 GLB1L3Q8NCI6 653 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 TNIP2Q8NFZ5 429 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 GOT1L1Q8NHS2 421 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 MBD3L2Q8NHZ7 208 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 SPOCK3Q9BQ16 436 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 PIGQQ9BRB3 760 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 HOXD1Q9GZZ0 328 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 NPDC1Q9NQX5 325 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 BTNL2Q9UIR0 455 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 USH1CQ9Y6N9 552 aa15.6■□□□□ 0.09
CHMP1A-208ENST00000550102 CLCA1A8K7I4 914 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 DVL2O14641 736 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 CPSF4O95639 269 aaKnown RBP15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 PGRP06401 933 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 PEPDP12955 493 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 ZNF17P17021 662 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 MATN1P21941 496 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 CHI3L1P36222 383 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 STARP49675 285 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 KHKP50053 298 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 ZNF41P51814 821 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 DGKQP52824 942 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 LRRC74AQ0VAA2 488 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 GSTA3Q16772 222 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 GLYR1Q49A26 553 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 PDCD4Q53EL6 469 aaKnown RBP15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 C16orf62Q7Z3J2 963 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 ACBD4Q8NC06 268 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 NAXEQ8NCW5 288 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 MIPOL1Q8TD10 442 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 MARK4Q96L34 752 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 SLC35A5Q9BS91 424 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 ENKD1Q9H0I2 346 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 KCNE3Q9Y6H6 103 aa15.59■□□□□ 0.09
CHMP1A-208ENST00000550102 ANKRD17O75179 2603 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms