RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PCGF2P35227 344 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 GAS1P54826 345 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 SNTA1Q13424 505 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 INPP5JQ15735 1006 aaPredicted RBP19.39■□□□□ 0.69
VPS29-206ENST00000549578 ZNF141Q15928 474 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 PRAMEF8Q5VWM4 474 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 PRAMEF7Q5VXH5 474 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 AP1ARQ63HQ0 302 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 BNC2Q6ZN30 1099 aaPredicted RBP19.39■□□□□ 0.69
VPS29-206ENST00000549578 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.39■□□□□ 0.69
VPS29-206ENST00000549578 ZNF527Q8NB42 609 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 OR2M7Q8NG81 312 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 BBS10Q8TAM1 723 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 C1orf21Q9H246 121 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 MTHFD2LQ9H903 347 aaPredicted RBP19.39■□□□□ 0.69
VPS29-206ENST00000549578 BCL2L10Q9HD36 194 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 ANGPT4Q9Y264 503 aa19.39■□□□□ 0.69
VPS29-206ENST00000549578 ALG1L2C9J202 215 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 MEOX1P50221 254 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 PMP22Q01453 160 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 GABPB1Q06547 395 aaPredicted RBP19.38■□□□□ 0.69
VPS29-206ENST00000549578 KLHL26Q53HC5 615 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 TBCELQ5QJ74 424 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 SLC30A6Q6NXT4 461 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 ERICH5Q6P6B1 374 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 MICU2Q8IYU8 434 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 Q8NA96 180 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 FAM156AQ8NDB6 213 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 SLC39A7Q92504 469 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 NTNG2Q96CW9 530 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 JSRP1Q96MG2 331 aaPredicted RBP19.38■□□□□ 0.69
VPS29-206ENST00000549578 KCTD14Q9BQ13 255 aaPredicted RBP19.38■□□□□ 0.69
VPS29-206ENST00000549578 FAM173AQ9BQD7 235 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 TUBA8Q9NY65 449 aaPredicted RBP19.38■□□□□ 0.69
VPS29-206ENST00000549578 HRH3Q9Y5N1 445 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 WIF1Q9Y5W5 379 aa19.38■□□□□ 0.69
VPS29-206ENST00000549578 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.38■□□□□ 0.69
VPS29-206ENST00000549578 SPTA1P02549 2419 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 ELOVL7A1L3X0 281 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 AGAP5A6NIR3 686 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 KLRC4-KLRK1H3BQV0 150 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 ANGPTL1O95841 491 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 RFC3P40938 356 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 CLK3P49761 638 aaKnown RBP19.37■□□□□ 0.69
VPS29-206ENST00000549578 KLRB1Q12918 225 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 CD226Q15762 336 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 DTNAQ9Y4J8 743 aa19.37■□□□□ 0.69
VPS29-206ENST00000549578 CLDN24A6NM45 220 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 GYG2O15488 501 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 NDUFB5O43674 189 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 GCM2O75603 506 aaPredicted RBP19.36■□□□□ 0.69
VPS29-206ENST00000549578 SNX4O95219 450 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 TCN1P20061 433 aaPredicted RBP19.36■□□□□ 0.69
VPS29-206ENST00000549578 RPS4Y1P22090 263 aaKnown RBP19.36■□□□□ 0.69
VPS29-206ENST00000549578 MASP1P48740 699 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 PCBP3P57721 371 aaKnown RBP19.36■□□□□ 0.69
VPS29-206ENST00000549578 CEACAM7Q14002 265 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 SAMD4BQ5PRF9 694 aaKnown RBP19.36■□□□□ 0.69
VPS29-206ENST00000549578 OR5M10Q6IEU7 315 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 CCDC121Q6ZUS5 278 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 SLC30A8Q8IWU4 369 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 PEX5LQ8IYB4 626 aa19.36■□□□□ 0.69
VPS29-206ENST00000549578 SUCOQ9UBS9 1254 aaKnown RBP19.36■□□□□ 0.69
VPS29-206ENST00000549578 SPENQ96T58 3664 aaKnown RBP19.36■□□□□ 0.69
VPS29-206ENST00000549578 A0A1W2PQD3 144 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 GNB5O14775 395 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 DNAJA2O60884 412 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 TRIM3O75382 744 aaPredicted RBP19.35■□□□□ 0.69
VPS29-206ENST00000549578 ATP5HO75947 161 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 FOXO1Q12778 655 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 NFATC3Q12968 1075 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 FNDC7Q5VTL7 733 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 PACS2Q86VP3 889 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 VRK2Q86Y07 508 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 OR52P1PQ8NH57 321 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 PHOSPHO1Q8TCT1 267 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 DUSP19Q8WTR2 217 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 PMM1Q92871 262 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 ZNF597Q96LX8 424 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 FRMD6Q96NE9 622 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 BBC3Q96PG8 261 aaPredicted RBP19.35■□□□□ 0.69
VPS29-206ENST00000549578 BTBD10Q9BSF8 475 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 CD300AQ9UGN4 299 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 GPC6Q9Y625 555 aaPredicted RBP19.35■□□□□ 0.69
VPS29-206ENST00000549578 SERINC4A6NH21 518 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 LRRC3CA6NJW4 275 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 B4DXG7 233 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 RASAL1O95294 804 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 DBIP07108 87 aaKnown RBP19.35■□□□□ 0.69
VPS29-206ENST00000549578 ETS2P15036 469 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 IL7RP16871 459 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 MSX2P35548 267 aaPredicted RBP19.35■□□□□ 0.69
VPS29-206ENST00000549578 VEZF1Q14119 521 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 NDUFAF6Q330K2 333 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 DNAL1Q4LDG9 190 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 INTS11Q5TA45 600 aaKnown RBP19.35■□□□□ 0.69
VPS29-206ENST00000549578 KRT73Q86Y46 540 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 WDSUB1Q8N9V3 476 aa19.35■□□□□ 0.69
VPS29-206ENST00000549578 FAM98AQ8NCA5 519 aaKnown RBP19.35■□□□□ 0.69
VPS29-206ENST00000549578 WDR60Q8WVS4 1066 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms