RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 INMT-MINDY4F8WBC2 141 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 PPM1BO75688 479 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 APBB3O95704 486 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 CAV3P56539 151 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 TRA2BP62995 288 aaKnown RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 MRPL2Q5T653 305 aaKnown RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 THAP4Q8WY91 577 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 ADOQ96SZ5 270 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 ZNF559Q9BR84 538 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 MED20Q9H944 212 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 STOML2Q9UJZ1 356 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 SLC16A6O15403 523 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 IGFBP1P08833 259 aaPredicted RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 OR1D4P47884 311 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 CSNK1EP49674 416 aaKnown RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 GMFBP60983 142 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 ZNF181Q2M3W8 571 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 ARHGAP11AQ6P4F7 1023 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 ZNF101Q8IZC7 436 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 OR6N1Q8NGY5 312 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 TBC1D15Q8TC07 691 aa15.26■□□□□ 0.03
CUX1-213ENST00000549414 PITHD1Q9GZP4 211 aaPredicted RBP15.26■□□□□ 0.03
CUX1-213ENST00000549414 KDM4DQ6B0I6 523 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 RPL13AP3Q6NVV1 102 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 SYNPOQ8N3V7 929 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 ABCG5Q9H222 651 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 FAIMQ9NVQ4 179 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 NLKQ9UBE8 527 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 PADI2Q9Y2J8 665 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 SPTAN1Q13813 2472 aaKnown RBP15.25■□□□□ 0.03
CUX1-213ENST00000549414 PRAMEF2O60811 474 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 AP2S1P53680 142 aaPredicted RBP15.25■□□□□ 0.03
CUX1-213ENST00000549414 TIAL1Q01085 375 aaKnown RBP eCLIP15.25■□□□□ 0.03
CUX1-213ENST00000549414 RHBDD1Q8TEB9 315 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 SPRYD4Q8WW59 207 aaPredicted RBP15.25■□□□□ 0.03
CUX1-213ENST00000549414 DPAGT1Q9H3H5 408 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 VNN3Q9NY84 501 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 KIR2DS5A0A0G2JLQ3 304 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 A0A0G2JNG1 304 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 KIR2DS3K7RE56 304 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 RAD1O60671 282 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 PRR35P0CG20 571 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 MAP2K3P46734 347 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 KIR2DS5Q14953 304 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 MFSD9Q8NBP5 474 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 PJA1Q8NG27 643 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 OR13H1Q8NG92 308 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 MBOAT4Q96T53 435 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 RHNO1Q9BSD3 238 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 CENPOQ9BU64 300 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 ZNF443Q9Y2A4 671 aaPredicted RBP15.25■□□□□ 0.03
CUX1-213ENST00000549414 HSPB11Q9Y547 144 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 LRIT2A6NDA9 550 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 AREL1O15033 823 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 BMP1P13497 986 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 FUT1P19526 365 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 CD22P20273 847 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 HSD11B1P28845 292 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 KCNJ5P48544 419 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 CHAF1BQ13112 559 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 AKIRIN2Q53H80 203 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 TMPRSS12Q86WS5 348 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 GPALPP1Q8IXQ4 340 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 DRAXINQ8NBI3 349 aaPredicted RBP15.25■□□□□ 0.03
CUX1-213ENST00000549414 THSD1Q9NS62 852 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 SH2B3Q9UQQ2 575 aa15.25■□□□□ 0.03
CUX1-213ENST00000549414 OLFM2O95897 454 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 ZNF20P17024 532 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 RORAP35398 523 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 ADPRHP54922 357 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 SCGB2B2Q4G0G5 96 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 C4orf46Q504U0 113 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 SOWAHCQ53LP3 525 aaPredicted RBP15.24■□□□□ 0.03
CUX1-213ENST00000549414 C6orf183Q5T699 404 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 LRFN4Q6PJG9 635 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 DCDC5Q6ZRR9 648 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 CNN2Q99439 309 aaKnown RBP15.24■□□□□ 0.03
CUX1-213ENST00000549414 TAS2R10Q9NYW0 307 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 PSORS1C1Q9UIG5 152 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 ADAM29Q9UKF5 820 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 WDR37Q9Y2I8 494 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 POLR1CO15160 346 aaPredicted RBP15.24■□□□□ 0.03
CUX1-213ENST00000549414 ELAVL4P26378 380 aaKnown RBP15.24■□□□□ 0.03
CUX1-213ENST00000549414 TMED4Q7Z7H5 227 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 OR5T3Q8NGG3 340 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 TANKQ92844 425 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 MCCC2Q9HCC0 563 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 ARHGAP33O14559 1287 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 NDUFB2O95178 105 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 CASRP41180 1078 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 STARP49675 285 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 ZNF41P51814 821 aaPredicted RBP15.24■□□□□ 0.03
CUX1-213ENST00000549414 ACTC1P68032 377 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 ACTA1P68133 377 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 KCNJ10P78508 379 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 OR5M10Q6IEU7 315 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 C1orf94Q6P1W5 598 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 DNM1P34Q6PK57 102 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 PTOV1Q86YD1 416 aa15.24■□□□□ 0.03
CUX1-213ENST00000549414 OR13C2Q8NGS9 318 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms