RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 BEX1Q9HBH7 125 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 PTTG3PQ9NZH4 202 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 A0A0G2JK05 382 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 J3QRE1 110 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 SERPIND1P05546 499 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 DNASE1P24855 282 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 FPR3P25089 353 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 AHRP35869 848 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 LBX1P52954 281 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 DGCR2P98153 550 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 GRK1Q15835 563 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 TJAP1Q5JTD0 557 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF697Q5TEC3 545 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 PYHIN1Q6K0P9 492 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 TOMM5Q8N4H5 51 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 GALNT11Q8NCW6 608 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 OR8K5Q8NH50 307 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 GIMAP1Q8WWP7 306 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 YIPF5Q969M3 257 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 DTD2Q96FN9 168 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CAMK1GQ96NX5 476 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CACNG6Q9BXT2 260 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 POLMQ9NP87 494 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 BABAM2Q9NXR7 383 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 IL20Q9NYY1 176 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 H2AFY2Q9P0M6 372 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CXXC1Q9P0U4 656 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 IL36AQ9UHA7 158 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 TMEM5Q9Y2B1 443 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 KIAA1549LQ6ZVL6 1849 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 CARNS1A5YM72 827 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 E9PI62 339 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 FZD7O75084 574 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 ERAL1O75616 437 aaKnown RBP12.81□□□□□ -0.36
HDAC7-228ENST00000548938 IFNA7P01567 189 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 GCGRP47871 477 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 RNF144AP50876 292 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-228ENST00000548938 STXBP1P61764 594 aaKnown RBP12.81□□□□□ -0.36
HDAC7-228ENST00000548938 HTRA4P83105 476 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-228ENST00000548938 DUSP2Q05923 314 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 MLC1Q15049 377 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 PLBD1Q6P4A8 553 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 CXXC5Q7LFL8 322 aaKnown RBP12.81□□□□□ -0.36
HDAC7-228ENST00000548938 C16orf62Q7Z3J2 963 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 KCTD12Q96CX2 325 aaKnown RBP12.81□□□□□ -0.36
HDAC7-228ENST00000548938 SAMD8Q96LT4 415 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 SLC35C2Q9NQQ7 365 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 DLL4Q9NR61 685 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 KLHL1Q9NR64 748 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 UBQLN2Q9UHD9 624 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 SLC13A4Q9UKG4 626 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 MEIKINA0A087WXM9 373 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 A0A1W2PS29 197 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 CDC42EP2O14613 210 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 TOXO94900 526 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 SULT1A3P0DMM9 295 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 SULT1A4P0DMN0 295 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 TAS2R38P59533 333 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 PUDPQ08623 228 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 ST3GAL3Q11203 375 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 GSG1Q2KHT4 349 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 RTL4Q6ZR62 310 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 ACBD7Q8N6N7 88 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 TMEM255BQ8WV15 326 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 RAD51AP1Q96B01 352 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 RGMAQ96B86 450 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 MRGPRX3Q96LB0 322 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 ZSWIM3Q96MP5 696 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 BBS4Q96RK4 519 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 ARHGDIGQ99819 225 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 TEX12Q9BXU0 123 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 ZCCHC2Q9C0B9 1178 aaKnown RBP12.81□□□□□ -0.36
HDAC7-228ENST00000548938 EQTNQ9NQ60 294 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 PTPRSQ13332 1948 aa12.81□□□□□ -0.36
HDAC7-228ENST00000548938 TCF20Q9UGU0 1960 aaKnown RBP12.8□□□□□ -0.36
HDAC7-228ENST00000548938 CDH23Q9H251 3354 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 A0A0B4J203 849 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 A0A0G2JPF8 293 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 HNRNPCL2B2RXH8 293 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 HNRNPCL3B7ZW38 293 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 MT-ND4P03905 459 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 THY1P04216 161 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 HNRNPCL4P0DMR1 293 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 TYRP14679 529 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 STAT5AP42229 794 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 ZP1P60852 638 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 E2F1Q01094 437 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 BDH1Q02338 343 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 SLC3A1Q07837 685 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 MTFR2Q6P444 385 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 GPALPP1Q8IXQ4 340 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 OR2T33Q8NG76 320 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 ACOT11Q8WXI4 607 aaPredicted RBP12.8□□□□□ -0.36
HDAC7-228ENST00000548938 NXPE2Q96DL1 559 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 C12orf66Q96MD2 445 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 ZFP3Q96NJ6 502 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 JAM3Q9BX67 310 aa12.8□□□□□ -0.36
HDAC7-228ENST00000548938 SLC38A1Q9H2H9 487 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms