RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 FGF4P08620 206 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 ALOX5P09917 674 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 BCKDHAP12694 445 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 HPGDP15428 266 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 KLK2P20151 261 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 ADH6P28332 368 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 EIF1AXP47813 144 aaKnown RBP6.04□□□□□ -1.44
SCAF11-211ENST00000547950 KCNJ5P48544 419 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 PRR5P85299 388 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 DUSP5Q16690 384 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 UGT3A2Q3SY77 523 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 VPS26BQ4G0F5 336 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 CCNJQ5T5M9 372 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 VWA1Q6PCB0 445 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 ZCCHC23Q6ZST2 131 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 R3HCC1LQ7Z5L2 792 aaKnown RBP6.04□□□□□ -1.44
SCAF11-211ENST00000547950 BTLAQ7Z6A9 289 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 TGIF2LYQ8IUE0 185 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 CDRT4Q8N9R6 151 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 ZNF610Q8N9Z0 462 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 SLC16A11Q8NCK7 471 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 OR7A2PQ8NGA2 310 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 FNDC9Q8TBE3 224 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 TCP10LQ8TDR4 215 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 NUDT8Q8WV74 236 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 TWIST2Q8WVJ9 160 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCAF11-211ENST00000547950 JADE3Q92613 823 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 C1GALT1C1Q96EU7 318 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 APOPT1Q96IL0 206 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 ZNF845Q96IR2 970 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-211ENST00000547950 WFIKKN1Q96NZ8 548 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 CCT7Q99832 543 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 PIGQQ9BRB3 760 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 SLC39A3Q9BRY0 314 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 TRMOQ9BU70 441 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 PINK1Q9BXM7 581 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 PRRG4Q9BZD6 226 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 OPN3Q9H1Y3 402 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-211ENST00000547950 ANKZF1Q9H8Y5 726 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 EML4Q9HC35 981 aaKnown RBP6.04□□□□□ -1.44
SCAF11-211ENST00000547950 FBXO34Q9NWN3 711 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 C6orf203Q9P0P8 240 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-211ENST00000547950 GIMAP2Q9UG22 337 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 PACSIN3Q9UKS6 424 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 EIF3LQ9Y262 564 aaKnown RBP6.04□□□□□ -1.44
SCAF11-211ENST00000547950 VDAC3Q9Y277 283 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 SNX8Q9Y5X2 465 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 AP4B1Q9Y6B7 739 aa6.04□□□□□ -1.44
SCAF11-211ENST00000547950 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 UQCRHLA0A096LP55 91 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 A0A1W2PRB8 838 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 WDR91A4D1P6 747 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 TMEM114B3SHH9 223 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 NPIPB8E9PQR5 432 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 EIF1AYO14602 144 aaKnown RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 EMC8O43402 210 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 HCRTR2O43614 444 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 NPHS1O60500 1241 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 TBX19O60806 448 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 KCNK2O95069 426 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 NKX2-2O95096 273 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 OXSR1O95747 527 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 RAF1P04049 648 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 HMGN2P05204 90 aaKnown RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 CRHP06850 196 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ACP2P11117 423 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 LAMP1P11279 417 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 NEFHP12036 1026 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 CREB1P16220 341 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 DDX5P17844 614 aaKnown RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 TBXA2RP21731 343 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 MAPK1P28482 360 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 HPCAL1P37235 193 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 CD79BP40259 229 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 MAP3K8P41279 467 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 KIR2DL2P43627 348 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ASMTP46597 345 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 SERPINB4P48594 390 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 RPS3AP61247 264 aaKnown RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 VSNL1P62760 191 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 PDE7AQ13946 482 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 GANABQ14697 944 aaKnown RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 PON3Q15166 354 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 EXOC3L2Q2M3D2 409 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 SPDYE7PQ495Y7 208 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 GLYR1Q49A26 553 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 CPTPQ5TA50 214 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 IL23RQ5VWK5 629 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ANKRD34AQ69YU3 496 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 MFSD12Q6NUT3 480 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ZNF474Q6S9Z5 364 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 LRIG3Q6UXM1 1119 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ZAR1Q86SH2 424 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 TRABD2AQ86V40 505 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 WDR75Q8IWA0 830 aaKnown RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 COX18Q8N8Q8 333 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 HOXB13Q92826 284 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ZBTB9Q96C00 473 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 MTERF3Q96E29 417 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms