RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 WDYHV1Q96HA8 205 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 SDF2Q99470 211 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 TTYH2Q9BSA4 534 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 PRDM14Q9GZV8 571 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 PCNX3Q9H6A9 2034 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 PTGES2Q9H7Z7 377 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 RPH3AQ9Y2J0 694 aaPredicted RBP17■□□□□ 0.31
PRPF40B-206ENST00000547764 NPIPA5A0A0B4J1W7 369 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 A0A1W2PQD3 144 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 AHRRA9YTQ3 701 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 NPIPA7E9PJI5 369 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 RFXANKO14593 260 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 GMFGO60234 142 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 HOXD4P09016 255 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 NPIPA8P0DM63 369 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 OR12D1P0DN82 309 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 COL8A1P27658 744 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 ART3Q13508 389 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 CDSNQ15517 529 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 FLYWCH1Q4VC44 716 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 TIGD2Q4W5G0 525 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 PM20D2Q8IYS1 436 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 RFWD2Q8NHY2 731 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 XAGE5Q8WWM1 108 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 RND1Q92730 232 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 RAB8BQ92930 207 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 VPS33AQ96AX1 596 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 SFXN2Q96NB2 322 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 HOXD1Q9GZZ0 328 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 NPHS2Q9NP85 383 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 MED4Q9NPJ6 270 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 CAMK2AQ9UQM7 478 aa16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 PHF3Q92576 2039 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-206ENST00000547764 NPIPB9F8W1W9 429 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 AGR2O95994 175 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 AK1P00568 194 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 GLI4P10075 376 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 HK1P19367 917 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 PTGER4P35408 488 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 DCTP40126 519 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 STARP49675 285 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 ATP12AP54707 1039 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 B3GALT5-AS1P59052 145 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 GANABQ14697 944 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 CD226Q15762 336 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 ARHGAP11BQ3KRB8 267 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 KLHL26Q53HC5 615 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 HEPHL1Q6MZM0 1159 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 AAGABQ6PD74 315 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 MSANTD1Q6ZTZ1 278 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 C16orf62Q7Z3J2 963 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 RNF130Q86XS8 419 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 FUNDC1Q8IVP5 155 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 STON2Q8WXE9 905 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 SDCCAG3Q96C92 435 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 C1GALT1C1Q96EU7 318 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 RMND5AQ9H871 391 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 HHATLQ9HCP6 504 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 SLC6A13Q9NSD5 602 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 EXD2Q9NVH0 621 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 COQ3Q9NZJ6 369 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 DCTN4Q9UJW0 460 aa16.98■□□□□ 0.31
PRPF40B-206ENST00000547764 ATP8B1O43520 1251 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 FCMRO60667 390 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 STX11O75558 287 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 CPN1P15169 458 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 CHMP24386 653 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 KHKP50053 298 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 ACSF3Q4G176 576 aaPredicted RBP16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 ATAD3BQ5T9A4 648 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 ENPP6Q6UWR7 440 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 ARSKQ6UWY0 536 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 DNAJC14Q6Y2X3 702 aaPredicted RBP16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 OLIG3Q7RTU3 272 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 MISPQ8IVT2 679 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 ZNF527Q8NB42 609 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 ITCHQ96J02 903 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 RNF6Q9Y252 685 aa16.97■□□□□ 0.31
PRPF40B-206ENST00000547764 KDM4EB2RXH2 506 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 PRSS44E7EML9 344 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 HMGN4O00479 90 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 CLDN14O95500 239 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 ANP32DO95626 131 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 ZCCHC18P0CG32 403 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 MSX1P28360 303 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 LHX2P50458 406 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 RNF144AP50876 292 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 ATP4BP51164 291 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 SRYQ05066 204 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 RCAN2Q14206 197 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 GPR68Q15743 365 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 RAET1LQ5VY80 246 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 BLOC1S3Q6QNY0 202 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 SEM1Q6ZVN7 128 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 MTERF4Q7Z6M4 381 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 CCDC71Q8IV32 467 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 OR5M1Q8NGP8 315 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 OR10Q1Q8NGQ4 319 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 PNPT1Q8TCS8 783 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms