RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 MANSC1Q9H8J5 431 aa11.96□□□□□ -0.49
CCDC59-202ENST00000547758 FARSBQ9NSD9 589 aaKnown RBP11.96□□□□□ -0.49
CCDC59-202ENST00000547758 COQ9O75208 318 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 NTN1O95631 604 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 PDYNP01213 254 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 OPN1LWP04000 364 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 C17orf67Q0P5P2 114 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 TMEM201Q5SNT2 666 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 HBMQ6B0K9 141 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 C11orf71Q6IPW1 123 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 C3orf62Q6ZUJ4 267 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 ESPNLQ6ZVH7 1005 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 CCDC91Q7Z6B0 441 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 LRRC8AQ8IWT6 810 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 FAM9CQ8IZT9 166 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 GTPBP8Q8N3Z3 284 aaPredicted RBP11.95□□□□□ -0.5
CCDC59-202ENST00000547758 ZNF525Q8N782 197 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 CEP112Q8N8E3 955 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 PTGR2Q8N8N7 351 aaPredicted RBP11.95□□□□□ -0.5
CCDC59-202ENST00000547758 FAM168AQ92567 244 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 TBL1XR1Q9BZK7 514 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 CHODLQ9H9P2 273 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 BRF2Q9HAW0 419 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 PCTPQ9UKL6 214 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 KCNS2Q9ULS6 477 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 SNX24Q9Y343 169 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 TENM1Q9UKZ4 2725 aa11.95□□□□□ -0.5
CCDC59-202ENST00000547758 A0A087WZY1 265 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 A0A0J9YW62 118 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 IL33O95760 270 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 ANGPTL1O95841 491 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 ADAP00813 363 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 PGRP06401 933 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 C2P06681 752 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 IL3P08700 152 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 RFX3P48380 749 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 RAC1P63000 192 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 PRR5P85299 388 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 ITGADQ13349 1161 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 P2RY6Q15077 328 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 FAM120AOSQ5T036 256 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 LIPNQ5VXI9 398 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 KLC3Q6P597 504 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 BHLHA15Q7RTS1 189 aaPredicted RBP11.94□□□□□ -0.5
CCDC59-202ENST00000547758 NUFIP2Q7Z417 695 aaKnown RBP11.94□□□□□ -0.5
CCDC59-202ENST00000547758 CCDC25Q86WR0 208 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 OR4F6Q8NGB9 312 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 RNF128Q8TEB7 428 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 ABHD3Q8WU67 409 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 SELENOMQ8WWX9 145 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 HTRA1Q92743 480 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 PHF21BQ96EK2 531 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 NSUN5Q96P11 429 aaKnown RBP11.94□□□□□ -0.5
CCDC59-202ENST00000547758 NPAS1Q99742 590 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 TMEM185BQ9H7F4 350 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 Q9N2J8 555 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 NMRK1Q9NWW6 199 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 KLHL13Q9P2N7 655 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 MCM8Q9UJA3 840 aa11.94□□□□□ -0.5
CCDC59-202ENST00000547758 MRTO4Q9UKD2 239 aaKnown RBP11.94□□□□□ -0.5
CCDC59-202ENST00000547758 C7orf72A4D263 438 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 ABCD4O14678 606 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 EIF3HO15372 352 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 SPRY1O43609 319 aaPredicted RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 KLHL2O95198 593 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 UTS2O95399 124 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 GSTA2P09210 222 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 PABPC4LP0CB38 370 aaKnown RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 HNF1AP20823 631 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 USF1P22415 310 aaPredicted RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 ME2P23368 584 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 PSMA4P25789 261 aaKnown RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 MPIP34949 423 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 GZMKP49863 264 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 PSMD4P55036 377 aaKnown RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 CSTF3Q12996 717 aaKnown RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 PPA1Q15181 289 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 RAB35Q15286 201 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 RNPS1Q15287 305 aaKnown RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 STK11Q15831 433 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 ZNF239Q16600 458 aaKnown RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 TECRLQ5HYJ1 363 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 PDSS1Q5T2R2 415 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 FAM166AQ6J272 317 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 APOOLQ6UXV4 268 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 TDRPQ86YL5 185 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 TUSC5Q8IXB3 177 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 C10orf105Q8TEF2 133 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 SLC9A6Q92581 669 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 PROX1Q92786 737 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 OSTF1Q92882 214 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 ZBTB8AQ96BR9 441 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 REXO5Q96IC2 774 aaKnown RBP11.93□□□□□ -0.5
CCDC59-202ENST00000547758 RNF145Q96MT1 663 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 GPR78Q96P69 363 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 PLA2G12AQ9BZM1 189 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 SLC35C2Q9NQQ7 365 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 CBLN4Q9NTU7 201 aa11.93□□□□□ -0.5
CCDC59-202ENST00000547758 SNX6Q9UNH7 406 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms