RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 CLN6Q9NWW5 311 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 RPS6KB2Q9UBS0 482 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 RP1P56715 2156 aa12.44□□□□□ -0.42
PTCH1-215ENST00000547672 ADAMTS9Q9P2N4 1935 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 NINQ8N4C6 2090 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 NUP210LQ5VU65 1888 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 SERINC4A6NH21 518 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 VSTM2BA6NLU5 285 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 CPSF4LA6NMK7 179 aaKnown RBP12.43□□□□□ -0.42
PTCH1-215ENST00000547672 ZAR1LA6NP61 321 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 C9J4A7 227 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 M0R3G1 203 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 MEN1O00255 615 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 SCDO00767 359 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 ABCB7O75027 752 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 ALOX12BO75342 701 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 ZIC2O95409 532 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-215ENST00000547672 DDAH2O95865 285 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 EPPINO95925 133 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 IGHEP01854 428 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 CYP4B1P13584 511 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 POLR2IP36954 125 aaKnown RBP12.43□□□□□ -0.42
PTCH1-215ENST00000547672 RBM34P42696 430 aaKnown RBP12.43□□□□□ -0.42
PTCH1-215ENST00000547672 SMSP52788 366 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 TSPAN31Q12999 210 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 TUBA3CQ13748 450 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 FGFBP1Q14512 234 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 MAD2L1BPQ15013 274 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-215ENST00000547672 PTGES3Q15185 160 aaKnown RBP12.43□□□□□ -0.42
PTCH1-215ENST00000547672 NPTX1Q15818 432 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 MEP1AQ16819 746 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 RPL13AP3Q6NVV1 102 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 PGBD2Q6P3X8 592 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 KLHL17Q6TDP4 642 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 MBOAT2Q6ZWT7 520 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 GDF7Q7Z4P5 450 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 SLC43A2Q8N370 569 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 OR2I1PQ8NGU4 316 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 OR8K3Q8NH51 312 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 RHOXF1Q8NHV9 184 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 DOK4Q8TEW6 326 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 ZNF721Q8TF20 911 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 DNAJA4Q8WW22 397 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-215ENST00000547672 NIPSNAP1Q9BPW8 284 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 ITPAQ9BY32 194 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 RXFP3Q9NSD7 469 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 RLIMQ9NVW2 624 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 PCDHGB5Q9Y5G0 923 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 PCDHGA6Q9Y5G7 932 aa12.43□□□□□ -0.42
PTCH1-215ENST00000547672 COL5A1P20908 1838 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-215ENST00000547672 A0A087WUU8 490 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 A8MUA0 341 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 IDSB3KWA1 339 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 NPIPB9F8W1W9 429 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 H3BN98 237 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 GTPBP1O00178 669 aaKnown RBP12.42□□□□□ -0.42
PTCH1-215ENST00000547672 SLC1A7O00341 560 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 LRP3O75074 770 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 CSTAP01040 98 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 NGFRP08138 427 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 POU2F1P14859 743 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 JUNBP17275 347 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-215ENST00000547672 TBXA2RP21731 343 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 IL12BP29460 328 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 SLC6A8P48029 635 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 RFX3P48380 749 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 ALDH3B2P48448 385 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 ZNF136P52737 540 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 PNLIPRP2P54317 469 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 MVKQ03426 396 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 EFR3AQ14156 821 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 OR1Q1Q15612 314 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 MAPK14Q16539 360 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 TMEM44Q2T9K0 475 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 ZBED5Q49AG3 693 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 KLHL26Q53HC5 615 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 PDZK1Q5T2W1 519 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 MEDAGQ5VYS4 303 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 ANKRD34AQ69YU3 496 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 ULK3Q6PHR2 472 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 PRR23CQ6ZRP0 262 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 RASSF6Q6ZTQ3 369 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 PTCHD4Q6ZW05 846 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 COX15Q7KZN9 410 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 OLIG3Q7RTU3 272 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 GPR141Q7Z602 305 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 ZNF614Q8N883 585 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 LSMEM1Q8N8F7 131 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 BPIFB6Q8NFQ5 453 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 FAM81AQ8TBF8 368 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 TEX47Q8TBZ9 253 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 TSLPQ969D9 159 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 NODALQ96S42 347 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 LPAR4Q99677 370 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 RSPO3Q9BXY4 272 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-215ENST00000547672 FAM117AQ9C073 453 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 IRF2BPLQ9H1B7 796 aa12.42□□□□□ -0.42
PTCH1-215ENST00000547672 EXOSC3Q9NQT5 275 aaKnown RBP12.42□□□□□ -0.42
PTCH1-215ENST00000547672 SLC39A1Q9NY26 324 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms