RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 OR5AK3PQ8NH89 298 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 LILRB4Q8NHJ6 448 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 ZPLD1Q8TCW7 415 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 DUSP19Q8WTR2 217 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 CA5BP1Q8WTZ4 195 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 DYDC1Q8WWB3 177 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 NEURL3Q96EH8 262 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 C1GALT1C1Q96EU7 318 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 OTUB1Q96FW1 271 aaPredicted RBP10.77□□□□□ -0.69
YBX3-217ENST00000546164 OR7D2Q96RA2 312 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 HOXD1Q9GZZ0 328 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 DSN1Q9H410 356 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 SERHL2Q9H4I8 314 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 PTGES2Q9H7Z7 377 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 ALKBH4Q9NXW9 302 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 ZIM2Q9NZV7 527 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 DKKL1Q9UK85 242 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 KCNE3Q9Y6H6 103 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 ABCA12Q86UK0 2595 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 TEX15Q9BXT5 2789 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 NPIPB9F8W1W9 429 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 LINC01387J3KSC0 135 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 UBDO15205 165 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 NDUFB5O43674 189 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 DIAPH2O60879 1101 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 SLC22A3O75751 556 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 CPSF4O95639 269 aaKnown RBP10.76□□□□□ -0.69
YBX3-217ENST00000546164 AGR2O95994 175 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 IL6P05231 212 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 GUSBP08236 651 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 ZNF708P17019 499 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 ATP6V1C1P21283 382 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 MATN1P21941 496 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 MSX1P28360 303 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 GRNP28799 593 aaKnown RBP10.76□□□□□ -0.69
YBX3-217ENST00000546164 TIMP3P35625 211 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 ADH7P40394 386 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 LHX2P50458 406 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 DGKQP52824 942 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 NME5P56597 212 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 STX5Q13190 355 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 AP1ARQ63HQ0 302 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 NSUN5P2Q63ZY6 315 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 SP5Q6BEB4 398 aaPredicted RBP10.76□□□□□ -0.69
YBX3-217ENST00000546164 HEPHL1Q6MZM0 1159 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 MSANTD1Q6ZTZ1 278 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 ADGRE4PQ86SQ3 457 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 GALNT10Q86SR1 603 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 LACC1Q8IV20 430 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 CCDC71Q8IV32 467 aaPredicted RBP10.76□□□□□ -0.69
YBX3-217ENST00000546164 ACBD4Q8NC06 268 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 CKAP2Q8WWK9 683 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 STON2Q8WXE9 905 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 CHMP6Q96FZ7 201 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 SLC35G5Q96KT7 338 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 MAGEB18Q96M61 343 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 SFXN2Q96NB2 322 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 UCN2Q96RP3 112 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 ZBTB18Q99592 522 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 ACBD3Q9H3P7 528 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 MED11Q9P086 117 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 CAMK2AQ9UQM7 478 aa10.76□□□□□ -0.69
YBX3-217ENST00000546164 A0A087WZY1 265 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 A0A0G2JNJ9 132 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 C7orf72A4D263 438 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 MBD3L4A6NDZ8 208 aaPredicted RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 MBD3L3A6NE82 208 aaPredicted RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 MBD3L5A6NJ08 208 aaPredicted RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 SCDO00767 359 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 HNRNPRO43390 633 aaKnown RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 TOXO94900 526 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 NUDT7P0C024 238 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 HPGDP15428 266 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 HK1P19367 917 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 CEACAM8P31997 349 aaPredicted RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 ZFP36L2P47974 494 aaKnown RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 IDH3AP50213 366 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 ATP12AP54707 1039 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 CLDN18P56856 261 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 RPS26P62854 115 aaKnown RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 TXNL4AP83876 142 aaKnown RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 TMEM44Q2T9K0 475 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 KLHL26Q53HC5 615 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 ZNF787Q6DD87 383 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 MTERF4Q7Z6M4 381 aaKnown RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 CLEC4FQ8N1N0 589 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 TRIML2Q8N7C3 387 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 OR5D16Q8NGK9 328 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 MBD3L2Q8NHZ7 208 aaPredicted RBP10.75□□□□□ -0.69
YBX3-217ENST00000546164 OIT3Q8WWZ8 545 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 OR52E6Q96RD3 313 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 PANX1Q96RD7 426 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 SDF2Q99470 211 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 CCDC28BQ9BUN5 200 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 NMUR2Q9GZQ4 415 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 ZNF350Q9GZX5 532 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 CALHM2Q9HA72 323 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 TCF7L2Q9NQB0 619 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 ZNF446Q9NWS9 450 aa10.75□□□□□ -0.69
YBX3-217ENST00000546164 Q9UFV3 132 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms