RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TRANK1O15050 2925 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 MDC1Q14676 2089 aaKnown RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 SCN2AQ99250 2005 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 BTN3A3O00478 584 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 KLF4O43474 513 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 AKR7A2O43488 359 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 HCN1O60741 890 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 IGHA1P01876 353 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 FAM157BP0CG42 384 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 ZNF888P0CJ79 500 aaPredicted RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 NDUFV2P19404 249 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 INPP1P49441 399 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 AGFG1P52594 562 aaKnown RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 SIM1P81133 766 aaPredicted RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 GALK2Q01415 458 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 MAPK14Q16539 360 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 KLHL12Q53G59 568 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 C2orf27AQ580R0 203 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 YIF1BQ5BJH7 314 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 VITQ6UXI7 678 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 WDR88Q6ZMY6 472 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 ZNF836Q6ZNA1 936 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 C7orf57Q8NEG2 295 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 ZCCHC10Q8TBK6 192 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 GANCQ8TET4 914 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 TIMP4Q99727 224 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 RPRD1BQ9NQG5 326 aaKnown RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 PHPT1Q9NRX4 125 aaPredicted RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 FBXO34Q9NWN3 711 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 THAP10Q9P2Z0 257 aaPredicted RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 WDR45Q9Y484 360 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 E9PI62 339 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 GTPBP1O00178 669 aaKnown RBP14.72□□□□□ -0.05
LDLR-204ENST00000545707 PAHP00439 452 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 MRPL3P09001 348 aaKnown RBP14.72□□□□□ -0.05
LDLR-204ENST00000545707 PRKAR1AP10644 381 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 SHC1P29353 583 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 PRKAR1BP31321 381 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 SLC16A1P53985 500 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 FXYD6P3P58550 94 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 RPE65Q16518 533 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 DUSP5Q16690 384 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 TANGO2Q6ICL3 276 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 MTSS1LQ765P7 747 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 CADM2Q8N3J6 435 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 MOAP1Q96BY2 351 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 MCUBQ9NWR8 336 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 EXTL2Q9UBQ6 330 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 PCDHGB7Q9Y5F8 929 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 RNF13O43567 381 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 PLOD3O60568 738 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 KAT7O95251 611 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 HLA-DQB1P01920 261 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 PRKCAP17252 672 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 MAKP20794 623 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 SDHBP21912 280 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 HLA-DMAP28067 261 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 ABATP80404 500 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 PDGFRLQ15198 375 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 PRAMEF8Q5VWM4 474 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 PRAMEF7Q5VXH5 474 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 MFSD12Q6NUT3 480 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 MZT2BQ6NZ67 158 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 LYPD8Q6UX82 237 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 GET4Q7L5D6 327 aaPredicted RBP14.72□□□□□ -0.05
LDLR-204ENST00000545707 VN1R4Q7Z5H5 301 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 SMARCD2Q92925 531 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 HDHD2Q9H0R4 259 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 OR52D1Q9H346 318 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 CDH10Q9Y6N8 788 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 STON1Q9Y6Q2 735 aa14.72□□□□□ -0.05
LDLR-204ENST00000545707 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.05
LDLR-204ENST00000545707 ZNF860A6NHJ4 632 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.71□□□□□ -0.05
LDLR-204ENST00000545707 TFPIP10646 304 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 GJA4P35212 333 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 ZNF136P52737 540 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 OR10A3P58181 314 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 FAPQ12884 760 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 TRMT12Q53H54 448 aaKnown RBP14.71□□□□□ -0.05
LDLR-204ENST00000545707 NRROSQ86YC3 692 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 DUSP18Q8NEJ0 188 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 OR52N1Q8NH53 320 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 C10orf90Q96M02 699 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 ALG8Q9BVK2 526 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 TEX12Q9BXU0 123 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 RMI1Q9H9A7 625 aa14.71□□□□□ -0.05
LDLR-204ENST00000545707 MUC22E2RYF6 1773 aaPredicted RBP14.71□□□□□ -0.06
LDLR-204ENST00000545707 CENPBD1B2RD01 187 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 SLC31A1O15431 190 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 CHST10O43529 356 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 DEFB134Q4QY38 66 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 ARL9Q6T311 187 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 RPTNQ6XPR3 784 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 PRR23CQ6ZRP0 262 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 MFSD9Q8NBP5 474 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 OR10H4Q8NGA5 316 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 KCNJ15Q99712 375 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 PRSS27Q9BQR3 290 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 TTTY10Q9BZA0 68 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms