RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 OSTF1Q92882 214 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 C3orf49Q96BT1 292 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 ERP27Q96DN0 273 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 MTBPQ96DY7 904 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 RNF145Q96MT1 663 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 NSUN5Q96P11 429 aaKnown RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 DHRS9Q9BPW9 319 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 SRXN1Q9BYN0 137 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 AHSPQ9NZD4 102 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 KLHL13Q9P2N7 655 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 PRSS50Q9UI38 385 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 SLC12A4Q9UP95 1085 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 GOLGA6L10A0A0M3HER8 536 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 TCRBV9S1A1TA0A576 114 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 FAM159BA6NKW6 160 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 PLOD3O60568 738 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 SEC31AO94979 1220 aaKnown RBP8.29□□□□□ -1.08
CHD4-212ENST00000545083 IL33O95760 270 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 TGFAP01135 160 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 IGKV1D-16P01601 117 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 IL3P08700 152 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 APEHP13798 732 aaKnown RBP8.29□□□□□ -1.08
CHD4-212ENST00000545083 ARL1P40616 181 aaPredicted RBP8.29□□□□□ -1.08
CHD4-212ENST00000545083 RFX3P48380 749 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 EFNA4P52798 201 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 C17orf67Q0P5P2 114 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 DECR1Q16698 335 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 PRSS53Q2L4Q9 553 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 PLPPR5Q32ZL2 321 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 CYP27C1Q4G0S4 372 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 TTC19Q6DKK2 380 aaPredicted RBP8.29□□□□□ -1.08
CHD4-212ENST00000545083 ESPNLQ6ZVH7 1005 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 TDRPQ86YL5 185 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 C1orf52Q8N6N3 182 aaKnown RBP8.29□□□□□ -1.08
CHD4-212ENST00000545083 OR2W6PQ8NHA6 318 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 RHEBL1Q8TAI7 183 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 EXOSC8Q96B26 276 aaKnown RBP8.29□□□□□ -1.08
CHD4-212ENST00000545083 OSBPL9Q96SU4 736 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 FAIM2Q9BWQ8 316 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 TAS2R9Q9NYW1 312 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 STOML1Q9UBI4 398 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 RNF14Q9UBS8 474 aa8.29□□□□□ -1.08
CHD4-212ENST00000545083 ING1Q9UK53 422 aaPredicted RBP8.29□□□□□ -1.08
CHD4-212ENST00000545083 PRKDCP78527 4128 aaKnown RBP8.29□□□□□ -1.08
CHD4-212ENST00000545083 A0A1W2PRB8 838 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 GXYLT2A0PJZ3 443 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 C7orf72A4D263 438 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 SYCE1LA8MT33 242 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 EFNA2O43921 213 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 UTS2O95399 124 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 ESRRBO95718 433 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 PDYNP01213 254 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 CSF3P09919 207 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 CDC25BP30305 580 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 SFTPDP35247 375 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 SPRP35270 261 aaPredicted RBP8.28□□□□□ -1.08
CHD4-212ENST00000545083 NR4A2P43354 598 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 FABP6P51161 128 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 CCNG1P51959 295 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 CARD18P57730 90 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 PRR5P85299 388 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 IFT88Q13099 833 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 GRAMD1BQ3KR37 738 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 CPTPQ5TA50 214 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 GTF2IRD2BQ6EKJ0 949 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 SLC22A25Q6T423 547 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 Q6ZT83 130 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 RPS27LQ71UM5 84 aaKnown RBP8.28□□□□□ -1.08
CHD4-212ENST00000545083 GTF2IRD2Q86UP8 949 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 FBXL14Q8N1E6 418 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 GATSQ8NAP1 163 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 SGMS2Q8NHU3 365 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 ATP6V1E2Q96A05 226 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 KLHL15Q96M94 604 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 GPR78Q96P69 363 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 USB1Q9BQ65 265 aaKnown RBP8.28□□□□□ -1.08
CHD4-212ENST00000545083 TBL1XR1Q9BZK7 514 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 TRIM31Q9BZY9 425 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 MED17Q9NVC6 651 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 CPSF2Q9P2I0 782 aaKnown RBP8.28□□□□□ -1.08
CHD4-212ENST00000545083 TXNDC16Q9P2K2 825 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 JRKLQ9Y4A0 524 aa8.28□□□□□ -1.08
CHD4-212ENST00000545083 CMYA5Q8N3K9 4069 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 A0A087WZY1 265 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 ESYT3A0FGR9 886 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 PPP6CO00743 305 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 NDUFB5O43674 189 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 PGM3O95394 542 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 PSMG1O95456 288 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 YES1P07947 543 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 PABPC4LP0CB38 370 aaKnown RBP8.27□□□□□ -1.09
CHD4-212ENST00000545083 CHN1P15882 459 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 IGHV1-2P23083 117 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 CRABP2P29373 138 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 OR3A2P47893 321 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 CLK3P49761 638 aaKnown RBP8.27□□□□□ -1.09
CHD4-212ENST00000545083 PDLIM4P50479 330 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 ZNF83P51522 516 aa8.27□□□□□ -1.09
CHD4-212ENST00000545083 MANFP55145 182 aaKnown RBP8.27□□□□□ -1.09
CHD4-212ENST00000545083 TRA2BP62995 288 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms