RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ICOSLGO75144 302 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PLATP00750 562 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 AHSGP02765 367 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 CPN2P22792 545 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 IL32P24001 234 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 CERS1P27544 350 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TLX1P31314 330 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 HNRNPH1P31943 449 aaKnown RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TTKP33981 857 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 GALNSP34059 522 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 NR4A2P43354 598 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PIK3CGP48736 1102 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 NPY2RP49146 381 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 STARP49675 285 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 HADHBP55084 474 aaKnown RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 SLC37A1P57057 533 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 RWDD2BP57060 319 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 HILS1P60008 231 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 IGLV3-21P80748 117 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 CHRNB3Q05901 458 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 BSPH1Q075Z2 132 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 LGALS3BPQ08380 585 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 IQCB1Q15051 598 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PON3Q15166 354 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 SGCBQ16585 318 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 ASTE1Q2TB18 679 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 ADPRMQ3LIE5 342 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 IQCCQ4KMZ1 466 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 KHDC1LQ5JSQ8 128 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 DEPDC1Q5TB30 811 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 C6orf163Q5TEZ5 329 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 C11orf71Q6IPW1 123 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 C11orf63Q6NUN7 778 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 NEPROQ6NW34 567 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF529Q6P280 563 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TMIGD1Q6UXZ0 262 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF793Q6ZN11 406 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 MBOAT1Q6ZNC8 495 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PIWIL4Q7Z3Z4 852 aaKnown RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PEG10Q86TG7 708 aaKnown RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TBC1D1Q86TI0 1168 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PLCZ1Q86YW0 608 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 CPNE9Q8IYJ1 553 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 UBQLNLQ8IYU4 475 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 FBXL14Q8N1E6 418 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 MUC15Q8N387 334 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 SNX31Q8N9S9 440 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 BBOF1Q8ND07 529 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 OR8K1Q8NGG5 319 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 RDH11Q8TC12 318 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 CD200R1Q8TD46 325 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 FIG4Q92562 907 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TANKQ92844 425 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 RIT1Q92963 219 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 S100PBPQ96BU1 408 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 FBXL8Q96CD0 374 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TMCO6Q96DC7 493 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 VPS39Q96JC1 886 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TSNARE1Q96NA8 513 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 OR14A2Q96R54 314 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 OR4K3Q96R72 315 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 GPR21Q99679 349 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 DHRS9Q9BPW9 319 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 FAM118BQ9BPY3 351 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TBCDQ9BTW9 1192 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 SSBP3Q9BWW4 388 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PINK1Q9BXM7 581 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 CAPS2Q9BXY5 557 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 POTEKPQ9BYX7 375 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PRRG4Q9BZD6 226 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 SPNS1Q9H2V7 528 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 METTL17Q9H7H0 456 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 NT5DC2Q9H857 520 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 SERHLQ9NQF3 203 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 MED29Q9NX70 200 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 PAQR5Q9NXK6 330 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 HEY2Q9UBP5 337 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TRMT6Q9UJA5 497 aaKnown RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 MGAT4BQ9UQ53 548 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 CFL2Q9Y281 166 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 DTX4Q9Y2E6 619 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 EPN1Q9Y6I3 576 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 SONP18583 2426 aaKnown RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 ARHGAP21Q5T5U3 1957 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 SNRNP200O75643 2136 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 LOC390937A0A1W2PQ73 354 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 NPEPPSL1A6NEC2 478 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 EFCAB8A8MWE9 144 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 VWC2LB2RUY7 222 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 GOLGA8KD6RF30 607 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 SMAD9O15198 467 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 TPD52L2O43399 206 aaKnown RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 SS18L1O75177 396 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 APRTP07741 180 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ABCB1P08183 1280 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-220ENST00000544550 C1GALT1C1LP0DN25 315 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 KITP10721 976 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF23P17027 643 aa3.61□□□□□ -1.83
SNHG1-220ENST00000544550 GNAZP19086 355 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms