RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ANP32DO95626 131 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 BMP2P12643 396 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 ABOP16442 354 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 ATP6V1C1P21283 382 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 ADSLP30566 484 aaPredicted RBP17.38■□□□□ 0.37
DDX55-211ENST00000544429 CRYZQ08257 329 aaKnown RBP17.38■□□□□ 0.37
DDX55-211ENST00000544429 CD226Q15762 336 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 ZNF141Q15928 474 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 FLYWCH1Q4VC44 716 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 EIPR1Q53HC9 387 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 C1QL3Q5VWW1 255 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 TYW3Q6IPR3 259 aaKnown RBP17.38■□□□□ 0.37
DDX55-211ENST00000544429 C16orf62Q7Z3J2 963 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 MTERF4Q7Z6M4 381 aaKnown RBP17.38■□□□□ 0.37
DDX55-211ENST00000544429 RETREG3Q86VR2 466 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 MISPQ8IVT2 679 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 PNPT1Q8TCS8 783 aaKnown RBP17.38■□□□□ 0.37
DDX55-211ENST00000544429 TRNT1Q96Q11 434 aaKnown RBP17.38■□□□□ 0.37
DDX55-211ENST00000544429 HHATLQ9HCP6 504 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 VAPAQ9P0L0 249 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 TINAGQ9UJW2 476 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 LIPT1Q9Y234 373 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 NPIPA5A0A0B4J1W7 369 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 CENPVL1A0A0U1RR11 272 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 NPIPA7E9PJI5 369 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 CLIC1O00299 241 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 SCDO00767 359 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 LRRTM2O43300 516 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 NDUFB5O43674 189 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 UGT2B17O75795 530 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 LDLRP01130 860 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 NPIPA8P0DM63 369 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 DRD4P21917 467 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 ANXA11P50995 505 aaKnown RBP17.37■□□□□ 0.37
DDX55-211ENST00000544429 GFRA1P56159 465 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 DSCR4P56555 118 aaPredicted RBP17.37■□□□□ 0.37
DDX55-211ENST00000544429 SF3A3Q12874 501 aaKnown RBP eCLIP17.37■□□□□ 0.377e-10■□□□□ 10.1
DDX55-211ENST00000544429 KLF10Q13118 480 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 UBAP2LQ14157 1087 aaKnown RBP17.37■□□□□ 0.37
DDX55-211ENST00000544429 GANABQ14697 944 aaKnown RBP17.37■□□□□ 0.37
DDX55-211ENST00000544429 ATAD3BQ5T9A4 648 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 VASNQ6EMK4 673 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 FRRS1Q6ZNA5 592 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 OLIG3Q7RTU3 272 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 SLC38A1Q9H2H9 487 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 DSN1Q9H410 356 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 MED11Q9P086 117 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 LEF1Q9UJU2 399 aaPredicted RBP17.37■□□□□ 0.37
DDX55-211ENST00000544429 NDUFAF1Q9Y375 327 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 DTNAQ9Y4J8 743 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 DOPEY2Q9Y3R5 2298 aa17.37■□□□□ 0.37
DDX55-211ENST00000544429 TRGV8A0A0C4DH27 118 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 PRRG2O14669 202 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 SLC22A2O15244 555 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 TRAPPC6AO75865 159 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 SNRPB2P08579 225 aaKnown RBP17.36■□□□□ 0.37
DDX55-211ENST00000544429 RNF224P0DH78 156 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 ETFAP13804 333 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 MSX1P28360 303 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 ADH7P40394 386 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 B3GALT5-AS1P59052 145 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 FADDQ13158 208 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 STX5Q13190 355 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 RGNQ15493 299 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 TMEM44Q2T9K0 475 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 WIPI1Q5MNZ9 446 aaPredicted RBP17.36■□□□□ 0.37
DDX55-211ENST00000544429 YRDCQ86U90 279 aaKnown RBP17.36■□□□□ 0.37
DDX55-211ENST00000544429 CD163Q86VB7 1156 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 ANKFN1Q8N957 763 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 ZNF527Q8NB42 609 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 SARAFQ96BY9 339 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 C1GALT1C1Q96EU7 318 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 DTNBP1Q96EV8 351 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 DMRTA2Q96SC8 542 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 LDAHQ9H6V9 325 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 RUBCNLQ9H714 662 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 TNFRSF10DQ9UBN6 386 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 MKLN1Q9UL63 735 aa17.36■□□□□ 0.37
DDX55-211ENST00000544429 ARHGAP21Q5T5U3 1957 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 GMNCA6NCL1 334 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 NPIPA2E9PIF3 369 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 E9PLN8 166 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 NPIPA3F8WFD2 350 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 FBP2O00757 339 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 TNFRSF21O75509 655 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 H6PDO95479 791 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 CHRM4P08173 479 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 TFPTP0C1Z6 253 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 HPGDP15428 266 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 RPS4Y1P22090 263 aaKnown RBP17.35■□□□□ 0.37
DDX55-211ENST00000544429 DPP4P27487 766 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 MAPK14Q16539 360 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 SYPL1Q16563 259 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 GXYLT1Q4G148 440 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 LRRC74BQ6ZQY2 392 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 SPATA21Q7Z572 469 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 ZNF619Q8N2I2 560 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 C10orf111Q8N326 155 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 FAM71CQ8NEG0 241 aa17.35■□□□□ 0.37
DDX55-211ENST00000544429 OR4K17Q8NGC6 315 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms