RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 LHFPL4Q7Z7J7 247 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 LRRTM1Q86UE6 522 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 GMCL1P1Q8NEA9 526 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 OR1B1Q8NGR6 318 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 SLC25A36Q96CQ1 311 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 C18orf12Q96KH6 178 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 POM121L2Q96KW2 1035 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 SYT11Q9BT88 431 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 CCDC28BQ9BUN5 200 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 TPPP3Q9BW30 176 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 FGFBP2Q9BYJ0 223 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 STRADBQ9C0K7 418 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 FAM114A2Q9NRY5 505 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF446Q9NWS9 450 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 EMCNQ9ULC0 261 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 CHMP2BQ9UQN3 213 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 KIF3AQ9Y496 699 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 MCM3APO60318 1980 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 E9PMD0 336 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 SGK494L7N484 410 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 TRAFD1O14545 582 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 EI24O14681 340 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 CIAO1O76071 339 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 GSTT2P0CG29 244 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 GSTT2BP0CG30 244 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 UGT1A4P22310 534 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 OXTRP30559 389 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 IFNAR2P48551 515 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 HAND2P61296 217 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 TIMM10P62072 90 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 PPIAP62937 165 aaKnown RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 MRPS6P82932 125 aaKnown RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 TCP10Q12799 353 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 SIX1Q15475 284 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 MS4A18Q3C1V0 323 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 TMEM41BQ5BJD5 291 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 BEND6Q5SZJ8 279 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 ABRAXAS1Q6UWZ7 409 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF562Q6V9R5 426 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 Q7L0L9 218 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 PRSS48Q7RTY5 328 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 RPAINQ86UA6 219 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 FAM131BQ86XD5 332 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 SAMD12Q8N8I0 201 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 NFAM1Q8NET5 270 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 OR52J3Q8NH60 311 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 GIPC3Q8TF64 312 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 FAM151AQ8WW52 585 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 GTF3AQ92664 365 aaKnown RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 BIRC7Q96CA5 298 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 RBM18Q96H35 190 aaKnown RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 C4orf36Q96KX1 117 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 MRPL13Q9BYD1 178 aaKnown RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 MOB1AQ9H8S9 216 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 TRPV5Q9NQA5 729 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 SLC9A8Q9Y2E8 581 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 LCTP09848 1927 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 COL2A1P02458 1487 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 TEX48A0A1B0GUV7 120 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 SOCS3O14543 225 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 SORBS2O94875 1100 aaKnown RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 POP4O95707 220 aaKnown RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 CALML3P27482 149 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 DPP4P27487 766 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 SAA4P35542 130 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 SOX6P35712 828 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 POU3F4P49335 361 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 ARFIP1P53367 373 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 CD300CQ08708 224 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 PPIL2Q13356 520 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 POM121L1PQ3SYA9 428 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 FKBP1CQ5VVH2 108 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 DMKNQ6E0U4 476 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 ASPHD2Q6ICH7 369 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 CES3Q6UWW8 571 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF841Q6ZN19 808 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 RANBP3LQ86VV4 465 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 ERO1BQ86YB8 467 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 CBWD2Q8IUF1 395 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 TBC1D21Q8IYX1 336 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 CENPLQ8N0S6 344 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF491Q8N8L2 437 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 FADS6Q8N9I5 356 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 STKLD1Q8NE28 680 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 ST6GALNAC5Q9BVH7 336 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 RBM24Q9BX46 236 aaKnown RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 GPR174Q9BXC1 333 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 RAB33BQ9H082 229 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 RIBC2Q9H4K1 309 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 RPAP3Q9H6T3 665 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-207ENST00000544052 TXLNGQ9NUQ3 528 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 C1orf123Q9NWV4 160 aa3.04□□□□□ -1.92
SCFD1-207ENST00000544052 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 MYH4Q9Y623 1939 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 COL6A3P12111 3177 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 IGLV4-3A0A075B6K6 122 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 TTC26A0AVF1 554 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 TRIM49BA6NDI0 452 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms