RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 ATAD3AQ9NVI7 634 aa11.82□□□□□ -0.52
RTN3-212ENST00000543123 MCTS1Q9ULC4 181 aaKnown RBP11.82□□□□□ -0.52
RTN3-212ENST00000543123 PROCRQ9UNN8 238 aa11.82□□□□□ -0.52
RTN3-212ENST00000543123 EMC9Q9Y3B6 208 aa11.82□□□□□ -0.52
RTN3-212ENST00000543123 DNAJC15Q9Y5T4 150 aa11.82□□□□□ -0.52
RTN3-212ENST00000543123 PTGDR2Q9Y5Y4 395 aa11.82□□□□□ -0.52
RTN3-212ENST00000543123 TLDC2A0PJX2 215 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 C7orf72A4D263 438 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 C16orf97H3BN30 126 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 EIF1AYO14602 144 aaKnown RBP11.81□□□□□ -0.52
RTN3-212ENST00000543123 CTIFO43310 598 aaKnown RBP11.81□□□□□ -0.52
RTN3-212ENST00000543123 OXSR1O95747 527 aaPredicted RBP11.81□□□□□ -0.52
RTN3-212ENST00000543123 FGF4P08620 206 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 KRT16P08779 473 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 TBXA2RP21731 343 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 UGT2B10P36537 528 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 MAP3K8P41279 467 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
RTN3-212ENST00000543123 CLDN15P56746 228 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 CLDN20P56880 219 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 IFFO1Q0D2I5 559 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 MLC1Q15049 377 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 TMEM44Q2T9K0 475 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 KRTAP21-3Q3LHN1 58 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 RFTN2Q52LD8 501 aaPredicted RBP11.81□□□□□ -0.52
RTN3-212ENST00000543123 PPP4R4Q6NUP7 873 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 FAM214BQ7L5A3 538 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 BTLAQ7Z6A9 289 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 GTPBP8Q8N3Z3 284 aaPredicted RBP11.81□□□□□ -0.52
RTN3-212ENST00000543123 ZNF527Q8NB42 609 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 OR5M1Q8NGP8 315 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 OR2T11Q8NH01 316 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 CLHC1Q8NHS4 586 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 ACTRT2Q8TDY3 377 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 TWIST2Q8WVJ9 160 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 JADE3Q92613 823 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 RTN4RQ9BZR6 473 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 OPN3Q9H1Y3 402 aaPredicted RBP11.81□□□□□ -0.52
RTN3-212ENST00000543123 C12orf65Q9H3J6 166 aaKnown RBP11.81□□□□□ -0.52
RTN3-212ENST00000543123 VDAC3Q9Y277 283 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 TRAF6Q9Y4K3 522 aa11.81□□□□□ -0.52
RTN3-212ENST00000543123 A0A1W2PQD3 144 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 H0YC42 278 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 SCAMP2O15127 329 aaKnown RBP11.8□□□□□ -0.52
RTN3-212ENST00000543123 ARHGEF9O43307 516 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 GMFGO60234 142 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 LYPLA1O75608 230 aaPredicted RBP11.8□□□□□ -0.52
RTN3-212ENST00000543123 KCNK2O95069 426 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 SYNGR4O95473 234 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 IGKV1D-16P01601 117 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 BCKDHAP12694 445 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 PPP3CBP16298 524 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 EIF1AXP47813 144 aaKnown RBP11.8□□□□□ -0.52
RTN3-212ENST00000543123 SUCLG1P53597 346 aaKnown RBP11.8□□□□□ -0.52
RTN3-212ENST00000543123 TPD52P55327 224 aaPredicted RBP11.8□□□□□ -0.52
RTN3-212ENST00000543123 CTBP2P56545 445 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 ADAM8P78325 824 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 FAM27E3Q08E93 113 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 ATP6AP1LQ52LC2 224 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 ZNF385BQ569K4 471 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 PDSS1Q5T2R2 415 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 STK32CQ86UX6 486 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 EXOC3L1Q86VI1 746 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 BANPQ8N9N5 519 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 SLC16A11Q8NCK7 471 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 FBXO30Q8TB52 745 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 PIGTQ969N2 578 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 CHMP6Q96FZ7 201 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 GMPPAQ96IJ6 420 aaPredicted RBP11.8□□□□□ -0.52
RTN3-212ENST00000543123 STACQ99469 402 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
RTN3-212ENST00000543123 BTBD2Q9BX70 525 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 TUBB1Q9H4B7 451 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 DUSP22Q9NRW4 184 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 GLRX2Q9NS18 164 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 ZCCHC3Q9NUD5 404 aaKnown RBP11.8□□□□□ -0.52
RTN3-212ENST00000543123 KLHL28Q9NXS3 571 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 BAIAP2L1Q9UHR4 511 aa11.8□□□□□ -0.52
RTN3-212ENST00000543123 ACANP16112 2415 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 A0A1W2PRB8 838 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 H3BNH8 94 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 PIP5K1BO14986 540 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 DIAPH2O60879 1101 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 CHRNGP07510 517 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 NUDT17P0C025 328 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 ACP2P11117 423 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 CD53P19397 219 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 FPR1P21462 350 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 CRYGSP22914 178 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 ALDH3A1P30838 453 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 EIF1P41567 113 aaKnown RBP11.79□□□□□ -0.52
RTN3-212ENST00000543123 RAC1P63000 192 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 POU6F2P78424 691 aaPredicted RBP11.79□□□□□ -0.52
RTN3-212ENST00000543123 DUSP5Q16690 384 aa11.79□□□□□ -0.52
RTN3-212ENST00000543123 LSM12Q3MHD2 195 aaKnown RBP11.79□□□□□ -0.52
RTN3-212ENST00000543123 ARL13AQ5H913 290 aaPredicted RBP11.79□□□□□ -0.52
RTN3-212ENST00000543123 CPTPQ5TA50 214 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms