RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 MINDY2Q8NBR6 621 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 RLN3Q8WXF3 142 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 DCLRE1CQ96SD1 692 aaKnown RBP12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 FGF20Q9NP95 211 aaPredicted RBP12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 MRPS18AQ9NVS2 196 aaKnown RBP12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 IL20Q9NYY1 176 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 ZNF232Q9UNY5 417 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 VCANP13611 3396 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 OR2W5A6NFC9 320 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 B4DGG1 531 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 PRAMEF26H0Y7S4 382 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 CDRT1O95170 752 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 MSL3P1P0C860 447 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 THEGLP0DJG4 465 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 GABRA3P34903 492 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 STAT5AP42229 794 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 RABIFP47224 123 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 RAB40BQ12829 278 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 AVL9Q8NBF6 648 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 ASB15Q8WXK1 588 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 NR4A3Q92570 626 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 OTULINQ96BN8 352 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 GPR174Q9BXC1 333 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 C8orf33Q9H7E9 229 aaPredicted RBP12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 TRIM45Q9H8W5 580 aaPredicted RBP12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 MED20Q9H944 212 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 HINT3Q9NQE9 182 aaKnown RBP12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 ZNF223Q9UK11 482 aaPredicted RBP12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 SSR3Q9UNL2 185 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 HS3ST3A1Q9Y663 406 aa12.71□□□□□ -0.37
SLC3A2-220ENST00000542922 SYNDIG1LA6NDD5 238 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 TGFBR3LH3BV60 316 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 HRKO00198 91 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 RGS5O15539 181 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 PLOD3O60568 738 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 STX11O75558 287 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 CBX7O95931 251 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 AGR2O95994 175 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 ZNF10P21506 573 aaPredicted RBP12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 GCGRP47871 477 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 MAZP56270 477 aaKnown RBP12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 HHEXQ03014 270 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 OR1Q1Q15612 314 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 ZNF791Q3KP31 576 aaPredicted RBP12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 KLHL22Q53GT1 634 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 KIAA0895LQ68EN5 471 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 DEFB119Q8N690 84 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 ZNF485Q8NCK3 441 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 OSTF1Q92882 214 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 CCDC3Q9BQI4 270 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 GSDMCQ9BYG8 508 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 CLCA2Q9UQC9 943 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 SF3B6Q9Y3B4 125 aaKnown RBP12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 SPTY2D1-AS1A0A0U1RR47 76 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 CDHR4A6H8M9 788 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 OR5K3A6NET4 321 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 SAGE2PA6NJ88 616 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 ADAM11O75078 769 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 CDC123O75794 336 aaPredicted RBP12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 DLGAP3O95886 979 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 THBS1P07996 1170 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 TSPAN19P0C672 248 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 NID1P14543 1247 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 IFNA8P32881 189 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 ETV6P41212 452 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 MAP3K8P41279 467 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 ZNF155Q12901 538 aaPredicted RBP12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 MADCAM1Q13477 382 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 INSL4Q14641 139 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 SPANXN2Q5MJ10 180 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 CDRT4Q8N9R6 151 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 OR4N2Q8NGD1 307 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 OR52R1Q8NGF1 315 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 SLC30A2Q9BRI3 323 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 ZNF649Q9BS31 505 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 HCAR1Q9BXC0 346 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 UBQLN3Q9H347 655 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 HCN3Q9P1Z3 774 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 KLHL3Q9UH77 587 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 CBLCQ9ULV8 474 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 ENTPD2Q9Y5L3 495 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 LAMA1P25391 3075 aa12.7□□□□□ -0.38
SLC3A2-220ENST00000542922 A0A075B6Q4 140 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 TMEM129A0AVI4 362 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 TRAPPC13A5PLN9 417 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 DBIP07108 87 aaKnown RBP12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 AZGP1P25311 298 aaKnown RBP12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 SLC1A3P43003 542 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 CAV3P56539 151 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 FABP5Q01469 135 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 HNRNPA0Q13151 305 aaKnown RBP12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 EIPR1Q53HC9 387 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 SLC35F1Q5T1Q4 408 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 SMARCD3Q6STE5 483 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 SPATC1Q76KD6 591 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 LAPTM4BQ86VI4 370 aa12.69□□□□□ -0.38
SLC3A2-220ENST00000542922 RANBP3LQ86VV4 465 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms