RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 NPIPA8P0DM63 369 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 ETS2P15036 469 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 PCGF2P35227 344 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 DNASE1L1P49184 302 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 RASSF2P50749 326 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 VEZF1Q14119 521 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 APOOLQ6UXV4 268 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 OR2M7Q8NG81 312 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 ZG16BQ96DA0 208 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 FRMD6Q96NE9 622 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 GALNT9Q9HCQ5 603 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 SDHAF3Q9NRP4 125 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 KCNE5Q9UJ90 142 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 DTNAQ9Y4J8 743 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 CNTRLQ7Z7A1 2325 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 ELOVL7A1L3X0 281 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 AGAP5A6NIR3 686 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 NDUFB5O43674 189 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 SCO2O43819 266 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 ANGPTL1O95841 491 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 PRB1P04280 392 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 GSK3BP49841 420 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 GAS1P54826 345 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 INAQ16352 499 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 SPATS1Q496A3 300 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 RPS26P11Q5JNZ5 115 aaPredicted RBP15.66■□□□□ 0.1
LIG1-204ENST00000542460 SAMD4BQ5PRF9 694 aaKnown RBP15.66■□□□□ 0.1
LIG1-204ENST00000542460 PDZK1Q5T2W1 519 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 INTS11Q5TA45 600 aaKnown RBP15.66■□□□□ 0.1
LIG1-204ENST00000542460 BNC2Q6ZN30 1099 aaPredicted RBP15.66■□□□□ 0.1
LIG1-204ENST00000542460 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.66■□□□□ 0.1
LIG1-204ENST00000542460 MARCH3Q86UD3 253 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 KRT73Q86Y46 540 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 PEX5LQ8IYB4 626 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 SLC7A6OSQ96CW6 309 aaPredicted RBP15.66■□□□□ 0.1
LIG1-204ENST00000542460 TMEM41AQ96HV5 264 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 QRSL1Q9H0R6 528 aaKnown RBP15.66■□□□□ 0.1
LIG1-204ENST00000542460 HHATLQ9HCP6 504 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 WIF1Q9Y5W5 379 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.66■□□□□ 0.1
LIG1-204ENST00000542460 KALRNO60229 2985 aa15.66■□□□□ 0.1
LIG1-204ENST00000542460 A0A0G2JMM0 328 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 A0A1W2PPB8 328 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 A0A1W2PRS3 328 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 PRORSD1PA6NEY8 169 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 KIR3DP1A8MWS1 328 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 H3BNH8 94 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 GYG2O15488 501 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 TRIM3O75382 744 aaPredicted RBP15.65■□□□□ 0.1
LIG1-204ENST00000542460 RASAL1O95294 804 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 DBIP07108 87 aaKnown RBP15.65■□□□□ 0.1
LIG1-204ENST00000542460 ENDOUP21128 410 aaKnown RBP15.65■□□□□ 0.1
LIG1-204ENST00000542460 MEOX1P50221 254 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 C17orf67Q0P5P2 114 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 MAPK14Q16539 360 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 CCDC121Q6ZUS5 278 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 PTRH1Q86Y79 214 aaKnown RBP15.65■□□□□ 0.1
LIG1-204ENST00000542460 MISPQ8IVT2 679 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 MICU2Q8IYU8 434 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 ARHGAP24Q8N264 748 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 ZNF614Q8N883 585 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 Q8NA96 180 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 ZFP62Q8NB50 900 aaPredicted RBP15.65■□□□□ 0.1
LIG1-204ENST00000542460 TNIP2Q8NFZ5 429 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 ZNF607Q96SK3 696 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 KCTD14Q9BQ13 255 aaPredicted RBP15.65■□□□□ 0.1
LIG1-204ENST00000542460 BTBD10Q9BSF8 475 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 RTN4RQ9BZR6 473 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 CACYBPQ9HB71 228 aaKnown RBP15.65■□□□□ 0.1
LIG1-204ENST00000542460 BOKQ9UMX3 212 aaPredicted RBP15.65■□□□□ 0.1
LIG1-204ENST00000542460 USP22Q9UPT9 525 aa15.65■□□□□ 0.1
LIG1-204ENST00000542460 CENPVL1A0A0U1RR11 272 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 C2orf72A6NCS6 295 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 SERINC4A6NH21 518 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 ADAM10O14672 748 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 SERPINB7O75635 380 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 PDE9AO76083 593 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 IL7RP16871 459 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 RPS4Y1P22090 263 aaKnown RBP15.64■□□□□ 0.09
LIG1-204ENST00000542460 AQP1P29972 269 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 ADH7P40394 386 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 MASP1P48740 699 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 PCBP3P57721 371 aaKnown RBP15.64■□□□□ 0.09
LIG1-204ENST00000542460 FOXO1Q12778 655 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 DNAL1Q4LDG9 190 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 PATL1Q86TB9 770 aaKnown RBP15.64■□□□□ 0.09
LIG1-204ENST00000542460 RNF148Q8N7C7 305 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 OR52P1PQ8NH57 321 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 DUSP19Q8WTR2 217 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 ZNF597Q96LX8 424 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 JSRP1Q96MG2 331 aaPredicted RBP15.64■□□□□ 0.09
LIG1-204ENST00000542460 SPATA5L1Q9BVQ7 753 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 ZFP64Q9NPA5 681 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.64■□□□□ 0.09
LIG1-204ENST00000542460 TUBA8Q9NY65 449 aaPredicted RBP15.64■□□□□ 0.09
LIG1-204ENST00000542460 LUZP4Q9P127 313 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 PPP4R1LQ9P1A2 415 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 CD300AQ9UGN4 299 aa15.64■□□□□ 0.09
LIG1-204ENST00000542460 PRPF19Q9UMS4 504 aaKnown RBP15.64■□□□□ 0.09
LIG1-204ENST00000542460 ZNF232Q9UNY5 417 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms