RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 KCNE3Q9Y6H6 103 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 EP300Q09472 2414 aaPredicted RBP15.09■□□□□ 0.01
VARS2-212ENST00000542001 MEIOCA2RUB1 952 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 MEIS3P1A6NDR6 274 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 SMLR1H3BR10 107 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 HMGN4O00479 90 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 PAHP00439 452 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 DNASE1L1P49184 302 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 PARM1Q6UWI2 310 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 TMIEQ8NEW7 156 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 RFT1Q96AA3 541 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 RANGRFQ9HD47 186 aaPredicted RBP15.09■□□□□ 0.01
VARS2-212ENST00000542001 ZNF69Q9UC07 566 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 TBC1D29Q9UFV1 150 aa15.09■□□□□ 0.01
VARS2-212ENST00000542001 PRSS38A1L453 326 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 TRAPPC13A5PLN9 417 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 AGR2O95994 175 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 HTR1AP08908 422 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 KCNJ5P48544 419 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 EMP3P54852 163 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 ERVK-25P63136 954 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 GPNMBQ14956 572 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 RPTNQ6XPR3 784 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 ZFPM2Q8WW38 1151 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 NEURL3Q96EH8 262 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 RPP25Q9BUL9 199 aaKnown RBP15.08■□□□□ 0.01
VARS2-212ENST00000542001 MOV10Q9HCE1 1003 aaKnown RBP15.08■□□□□ 0.01
VARS2-212ENST00000542001 NUDT15Q9NV35 164 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 RASD1Q9Y272 281 aa15.08■□□□□ 0.01
VARS2-212ENST00000542001 A0A087WUU8 490 aa15.08■□□□□ 0
VARS2-212ENST00000542001 A0A1W2PS29 197 aa15.08■□□□□ 0
VARS2-212ENST00000542001 METTL15A6NJ78 407 aa15.08■□□□□ 0
VARS2-212ENST00000542001 SLC9B1P1A6NJY1 282 aa15.08■□□□□ 0
VARS2-212ENST00000542001 XCR1P46094 333 aa15.08■□□□□ 0
VARS2-212ENST00000542001 RAE1P78406 368 aaKnown RBP15.08■□□□□ 0
VARS2-212ENST00000542001 LRRC37A5PQ49AS3 106 aa15.08■□□□□ 0
VARS2-212ENST00000542001 METTL21AQ8WXB1 218 aa15.08■□□□□ 0
VARS2-212ENST00000542001 BPIFA2Q96DR5 249 aa15.08■□□□□ 0
VARS2-212ENST00000542001 ERVK-19Q9WJR5 959 aa15.08■□□□□ 0
VARS2-212ENST00000542001 CCL27Q9Y4X3 112 aa15.08■□□□□ 0
VARS2-212ENST00000542001 FAM47E-STBD1D6RA91 191 aa15.08■□□□□ 0
VARS2-212ENST00000542001 H0YGG7 62 aa15.08■□□□□ 0
VARS2-212ENST00000542001 WISP3O95389 354 aaPredicted RBP15.08■□□□□ 0
VARS2-212ENST00000542001 SPARCP09486 303 aa15.08■□□□□ 0
VARS2-212ENST00000542001 GIMD1P0DJR0 217 aa15.08■□□□□ 0
VARS2-212ENST00000542001 APEHP13798 732 aaKnown RBP15.08■□□□□ 0
VARS2-212ENST00000542001 F8A1P23610 371 aa15.08■□□□□ 0
VARS2-212ENST00000542001 HCCSP53701 268 aa15.08■□□□□ 0
VARS2-212ENST00000542001 ARF3P61204 181 aaPredicted RBP15.08■□□□□ 0
VARS2-212ENST00000542001 RPS15AP62244 130 aaKnown RBP15.08■□□□□ 0
VARS2-212ENST00000542001 NTRK2Q16620 822 aa15.08■□□□□ 0
VARS2-212ENST00000542001 TMPRSS12Q86WS5 348 aa15.08■□□□□ 0
VARS2-212ENST00000542001 S100A13Q99584 98 aa15.08■□□□□ 0
VARS2-212ENST00000542001 SAGE1Q9NXZ1 904 aa15.08■□□□□ 0
VARS2-212ENST00000542001 ANKRD61A6NGH8 418 aa15.07■□□□□ 0
VARS2-212ENST00000542001 H7C1C5 153 aa15.07■□□□□ 0
VARS2-212ENST00000542001 IGFALSP35858 605 aa15.07■□□□□ 0
VARS2-212ENST00000542001 TRIM23P36406 574 aa15.07■□□□□ 0
VARS2-212ENST00000542001 LCN6P62502 163 aa15.07■□□□□ 0
VARS2-212ENST00000542001 MAB21L1Q13394 359 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ZMYND11Q15326 602 aa15.07■□□□□ 0
VARS2-212ENST00000542001 C4orf46Q504U0 113 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ARHGAP40Q5TG30 622 aa15.07■□□□□ 0
VARS2-212ENST00000542001 C8orf82Q6P1X6 216 aaPredicted RBP15.07■□□□□ 0
VARS2-212ENST00000542001 CALHM3Q86XJ0 350 aa15.07■□□□□ 0
VARS2-212ENST00000542001 OR52R1Q8NGF1 315 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ACOT11Q8WXI4 607 aaPredicted RBP15.07■□□□□ 0
VARS2-212ENST00000542001 C4orf36Q96KX1 117 aa15.07■□□□□ 0
VARS2-212ENST00000542001 CACNG6Q9BXT2 260 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ALOXE3Q9BYJ1 711 aa15.07■□□□□ 0
VARS2-212ENST00000542001 TXNL4BQ9NX01 149 aaKnown RBP15.07■□□□□ 0
VARS2-212ENST00000542001 COPS7AQ9UBW8 275 aa15.07■□□□□ 0
VARS2-212ENST00000542001 FARSAQ9Y285 508 aaKnown RBP15.07■□□□□ 0
VARS2-212ENST00000542001 GRIP1Q9Y3R0 1128 aa15.07■□□□□ 0
VARS2-212ENST00000542001 UGT2A1Q9Y4X1 527 aa15.07■□□□□ 0
VARS2-212ENST00000542001 I3L521 148 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ETV5P41161 510 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ETV1P50549 477 aa15.07■□□□□ 0
VARS2-212ENST00000542001 BLKP51451 505 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ZNF33BQ06732 778 aa15.07■□□□□ 0
VARS2-212ENST00000542001 SF3B4Q15427 424 aaKnown RBP eCLIP15.07■□□□□ 04e-7■■■□□ 18.3
VARS2-212ENST00000542001 DECR1Q16698 335 aa15.07■□□□□ 0
VARS2-212ENST00000542001 FAM109BQ6ICB4 259 aaPredicted RBP15.07■□□□□ 0
VARS2-212ENST00000542001 ANKRD33Q7Z3H0 272 aa15.07■□□□□ 0
VARS2-212ENST00000542001 DYNC2LI1Q8TCX1 351 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ZNF431Q8TF32 576 aaPredicted RBP15.07■□□□□ 0
VARS2-212ENST00000542001 MROQ9BYG7 248 aa15.07■□□□□ 0
VARS2-212ENST00000542001 FN3KQ9H479 309 aa15.07■□□□□ 0
VARS2-212ENST00000542001 CPNE5Q9HCH3 593 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ASIC5Q9NY37 505 aa15.07■□□□□ 0
VARS2-212ENST00000542001 FXYD6-FXYD2A0A087WZ82 144 aa15.07■□□□□ 0
VARS2-212ENST00000542001 LRIT2A6NDA9 550 aa15.07■□□□□ 0
VARS2-212ENST00000542001 OR2B3O76000 313 aa15.07■□□□□ 0
VARS2-212ENST00000542001 UBXN7O94888 489 aa15.07■□□□□ 0
VARS2-212ENST00000542001 PTTG1O95997 202 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ZNF823P16415 610 aa15.07■□□□□ 0
VARS2-212ENST00000542001 SHC1P29353 583 aa15.07■□□□□ 0
VARS2-212ENST00000542001 SOX18P35713 384 aa15.07■□□□□ 0
VARS2-212ENST00000542001 MAP3K8P41279 467 aa15.07■□□□□ 0
VARS2-212ENST00000542001 OLFML2AQ68BL7 652 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms