RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 TMEM239Q8WW34 195 aa13.59□□□□□ -0.23
GCFC2-211ENST00000541687 YIPF6Q96EC8 236 aa13.59□□□□□ -0.23
GCFC2-211ENST00000541687 ZNF582Q96NG8 517 aaPredicted RBP13.59□□□□□ -0.23
GCFC2-211ENST00000541687 DPYSL5Q9BPU6 564 aa13.59□□□□□ -0.23
GCFC2-211ENST00000541687 HPF1Q9NWY4 346 aa13.59□□□□□ -0.23
GCFC2-211ENST00000541687 ZNF69Q9UC07 566 aa13.59□□□□□ -0.23
GCFC2-211ENST00000541687 TCRBV21S2A2A0A5A6 115 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 SGK494L7N484 410 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 SCDO00767 359 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 NARSO43776 548 aaKnown RBP13.58□□□□□ -0.23
GCFC2-211ENST00000541687 RDH16O75452 317 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 SCG5P05408 212 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 MLLT3P42568 568 aaPredicted RBP13.58□□□□□ -0.23
GCFC2-211ENST00000541687 PUS10Q3MIT2 529 aaKnown RBP13.58□□□□□ -0.23
GCFC2-211ENST00000541687 SLC25A25Q6KCM7 469 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 GDPD1Q8N9F7 314 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 SPPL3Q8TCT6 385 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 PDXPQ96GD0 296 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 C7orf34Q96L11 122 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 PTCHD1Q96NR3 888 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 RANGRFQ9HD47 186 aaPredicted RBP13.58□□□□□ -0.23
GCFC2-211ENST00000541687 MED11Q9P086 117 aa13.58□□□□□ -0.23
GCFC2-211ENST00000541687 LOC105369274A0A096LPK9 316 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 HMGN4O00479 90 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 ITGA10O75578 1167 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 RGS9O75916 674 aaPredicted RBP13.58□□□□□ -0.24
GCFC2-211ENST00000541687 BCL6P41182 706 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 CBX5P45973 191 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 EIF1AXP47813 144 aaKnown RBP13.58□□□□□ -0.24
GCFC2-211ENST00000541687 FNTBP49356 437 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 ZNF77Q15935 545 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 DHRS4L2Q6PKH6 230 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 ZNF627Q7L945 461 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 OR4N4Q8N0Y3 316 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 CREB3L4Q8TEY5 395 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 HAVCR1Q96D42 359 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 B3GNT4Q9C0J1 378 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 AK6Q9Y3D8 172 aaKnown RBP13.58□□□□□ -0.24
GCFC2-211ENST00000541687 APC2O95996 2303 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 MEN1O00255 615 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 KIAA0355O15063 1070 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 CASC3O15234 703 aaKnown RBP13.58□□□□□ -0.24
GCFC2-211ENST00000541687 ALG11Q2TAA5 492 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 HSD17B12Q53GQ0 312 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 SERPINA12Q8IW75 414 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 NR4A3Q92570 626 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 HS6ST2Q96MM7 605 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 NECTIN4Q96NY8 510 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 PRTFDC1Q9NRG1 225 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 KCNE1BA0A087WTH5 132 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 SOCS6O14544 535 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 VAMP1P23763 118 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 HOXA9P31269 272 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 PSMB10P40306 273 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 SNTB2Q13425 540 aaKnown RBP13.58□□□□□ -0.24
GCFC2-211ENST00000541687 PRICKLE2Q7Z3G6 844 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 OR52I1Q8NGK6 324 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 AKAP1Q92667 903 aaKnown RBP eCLIP13.58□□□□□ -0.24
GCFC2-211ENST00000541687 CACNG6Q9BXT2 260 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 POLDIP3Q9BY77 421 aaKnown RBP13.58□□□□□ -0.24
GCFC2-211ENST00000541687 GABARAPL1Q9H0R8 117 aa13.58□□□□□ -0.24
GCFC2-211ENST00000541687 SEC16AO15027 2179 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 ADAM23O75077 832 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 RENP00797 406 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 ACP2P11117 423 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 RAE1P78406 368 aaKnown RBP13.57□□□□□ -0.24
GCFC2-211ENST00000541687 ERV3-1Q14264 604 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 RPE65Q16518 533 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 HYAL4Q2M3T9 481 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 DGLUCYQ7Z3D6 616 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 LMX1AQ8TE12 382 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 TMEM255BQ8WV15 326 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 AKIP1Q9NQ31 210 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 NUDT15Q9NV35 164 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 TAS2R10Q9NYW0 307 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 TMPRSS11EQ9UL52 423 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 A8MVJ9 347 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 IFNA7P01567 189 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 CD3GP09693 182 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 MAGEA2P43356 314 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 ZFP36L2P47974 494 aaKnown RBP13.57□□□□□ -0.24
GCFC2-211ENST00000541687 BLKP51451 505 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 GAS6Q14393 721 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 UBXN2BQ14CS0 331 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 SF3B4Q15427 424 aaKnown RBP eCLIP13.57□□□□□ -0.24
GCFC2-211ENST00000541687 PGGHGQ32M88 737 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 HES5Q5TA89 166 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 ZER1Q7Z7L7 766 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 NKAIN4Q8IVV8 208 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 OR8S1Q8NH09 359 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 TRMT10AQ8TBZ6 339 aaKnown RBP13.57□□□□□ -0.24
GCFC2-211ENST00000541687 NSMAFQ92636 917 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 BPIFA2Q96DR5 249 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 MSLNLQ96KJ4 702 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 ZFYVE21Q9BQ24 234 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 POLMQ9NP87 494 aaPredicted RBP13.57□□□□□ -0.24
GCFC2-211ENST00000541687 SLC52A3Q9NQ40 469 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 SAGE1Q9NXZ1 904 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
GCFC2-211ENST00000541687 OR2AT4A6NND4 320 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms