RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 TBC1D3DA0A087WVF3 549 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3IA0A087WXS9 549 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3EA0A087X179 549 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3KA0A087X1G2 549 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3FA6NER0 549 aaPredicted RBP9.74□□□□□ -0.85
CHFR-219ENST00000541341 LRRC72A6NJI9 287 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 C10orf142B7Z368 130 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3LB9A6J9 549 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 GAPDHSO14556 408 aaPredicted RBP9.74□□□□□ -0.85
CHFR-219ENST00000541341 PCDH17O14917 1159 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 MTRF1O75570 445 aaKnown RBP9.74□□□□□ -0.85
CHFR-219ENST00000541341 SERPINA3P01011 423 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 RAF1P04049 648 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3HP0C7X1 549 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 UGT2B7P16662 529 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 C5AR1P21730 350 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 SLC6A1P30531 599 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 GKP32189 559 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 CCR7P32248 378 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 DRD3P35462 400 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 MTNR1AP48039 350 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 GIPRP48546 466 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ADPRHP54922 357 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 PER3P56645 1201 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 GPLD1P80108 840 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ABATP80404 500 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 CDK5Q00535 292 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TAP2Q03519 686 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 C2orf80Q0P641 193 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 CDKN3Q16667 212 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ZNF805Q5CZA5 627 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ARSIQ5FYB1 569 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 FAM46CQ5VWP2 391 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 LIPKQ5VXJ0 399 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3GQ6DHY5 549 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3CQ6IPX1 549 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 SLC27A4Q6P1M0 643 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 CNIH2Q6PI25 160 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 BRAT1Q6PJG6 821 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 AGTRAPQ6RW13 159 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 RRM2BQ7LG56 351 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 MRGPREQ86SM8 312 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 GID4Q8IVV7 300 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 TBC1D3Q8IZP1 549 aaPredicted RBP9.74□□□□□ -0.85
CHFR-219ENST00000541341 SLC43A2Q8N370 569 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 CLDN19Q8N6F1 224 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ATP6V1C2Q8NEY4 427 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ANKK1Q8NFD2 765 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 OR7G3Q8NG95 312 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 OR52I1Q8NGK6 324 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 OR6K2Q8NGY2 324 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 OR8K5Q8NH50 307 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 CDC26Q8NHZ8 85 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.74□□□□□ -0.85
CHFR-219ENST00000541341 FYTTD1Q96QD9 318 aaKnown RBP9.74□□□□□ -0.85
CHFR-219ENST00000541341 OR4K3Q96R72 315 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ARPC5LQ9BPX5 153 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 WRAP53Q9BUR4 548 aaKnown RBP9.74□□□□□ -0.85
CHFR-219ENST00000541341 KATNB1Q9BVA0 655 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 EBPLQ9BY08 206 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 HDAC8Q9BY41 377 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 HDHD2Q9H0R4 259 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 PCED1AQ9H1Q7 454 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 MIXL1Q9H2W2 232 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 FN3KQ9H479 309 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 LIN7BQ9HAP6 207 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ACSS1Q9NUB1 689 aaPredicted RBP9.74□□□□□ -0.85
CHFR-219ENST00000541341 MAT2BQ9NZL9 334 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 P2RX2Q9UBL9 471 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 SCP2D1Q9UJQ7 156 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 CLCA2Q9UQC9 943 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 ATMQ13315 3056 aa9.74□□□□□ -0.85
CHFR-219ENST00000541341 PIKFYVEQ9Y2I7 2098 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 A0A1W2PR77 199 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 LEUTXA8MZ59 168 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 KRBOX1C9JBD0 128 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 SYT5O00445 386 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 GCM2O75603 506 aaPredicted RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 CLDN7O95471 211 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 ECDO95905 644 aaPredicted RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 C1GALT1C1LP0DN25 315 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 ETFAP13804 333 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 CTRB1P17538 263 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 TNNI3P19429 210 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 AZGP1P25311 298 aaKnown RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 ELAVL4P26378 380 aaKnown RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 SOX3P41225 446 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 STAT5AP42229 794 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 KCNJ5P48544 419 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 ARFIP1P53367 373 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 MVDP53602 400 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 HBA1P69905 142 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 DDX39BQ13838 428 aaKnown RBP9.73□□□□□ -0.85
CHFR-219ENST00000541341 SNAPC1Q16533 368 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 FAM69AQ5T7M9 428 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 NDUFAF5Q5TEU4 345 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 HBMQ6B0K9 141 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 CTRB2Q6GPI1 263 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 C22orf42Q6IC83 251 aa9.73□□□□□ -0.85
CHFR-219ENST00000541341 FAM71E1Q6IPT2 247 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms