RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 ZNF57Q68EA5 555 aaPredicted RBP3.03□□□□□ -1.92
RAP1B-224ENST00000541216 APOBEC3FQ8IUX4 373 aaKnown RBP3.03□□□□□ -1.92
RAP1B-224ENST00000541216 C9orf40Q8IXQ3 194 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 MINDY2Q8NBR6 621 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 NFAM1Q8NET5 270 aaPredicted RBP3.03□□□□□ -1.92
RAP1B-224ENST00000541216 ADAMTS16Q8TE57 1224 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 B3GALT6Q96L58 329 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 KIR2DL4Q99706 377 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 C19orf24Q9BVV8 132 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 CARD6Q9BX69 1037 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 ELOVL4Q9GZR5 314 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 RSPH9Q9H1X1 276 aaPredicted RBP3.03□□□□□ -1.92
RAP1B-224ENST00000541216 ZNF702PQ9H963 129 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 ZNF490Q9ULM2 529 aaPredicted RBP3.03□□□□□ -1.92
RAP1B-224ENST00000541216 DUSP12Q9UNI6 340 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 PLEKHA6Q9Y2H5 1048 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 PIK3C2BO00750 1634 aa3.03□□□□□ -1.92
RAP1B-224ENST00000541216 PXDNQ92626 1479 aa3.03□□□□□ -1.93
RAP1B-224ENST00000541216 PLCH1Q4KWH8 1693 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 RPGRIP1LQ68CZ1 1315 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 LAMC1P11047 1609 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 PTPN23Q9H3S7 1636 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 H0YL77 283 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 TNFSF11O14788 317 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 RAMP1O60894 148 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 SLC35G4P0C7Q5 338 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 SDC1P18827 310 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 PRKAR2BP31323 418 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 PRDX2P32119 198 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 ACVR1BP36896 505 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 RGRP47804 291 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 HERVK_113P63132 956 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 ERVK-8P63133 956 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 SERTAD2Q14140 314 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 PDIA5Q14554 519 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 RAB35Q15286 201 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 CAMK4Q16566 473 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 GLYR1Q49A26 553 aaPredicted RBP3.02□□□□□ -1.93
RAP1B-224ENST00000541216 SBK1Q52WX2 424 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 DMKNQ6E0U4 476 aaPredicted RBP3.02□□□□□ -1.93
RAP1B-224ENST00000541216 UFSP1Q6NVU6 142 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 ZNF544Q6NX49 715 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 MIER3Q7Z3K6 550 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 NET1Q7Z628 596 aaPredicted RBP3.02□□□□□ -1.93
RAP1B-224ENST00000541216 PARGQ86W56 976 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 ELMOD2Q8IZ81 293 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 CEND1Q8N111 149 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 CENPSQ8N2Z9 138 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 Q8N7P7 452 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 MGARPQ8TDB4 240 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 FAM122AQ96E09 287 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 ERVK-6Q9BXR3 956 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 NACA2Q9H009 215 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 ELOVL2Q9NXB9 296 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 APOBEC3BQ9UH17 382 aaKnown RBP3.02□□□□□ -1.93
RAP1B-224ENST00000541216 BCAP29Q9UHQ4 241 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 NUDCQ9Y266 331 aa3.02□□□□□ -1.93
RAP1B-224ENST00000541216 EXOSC1Q9Y3B2 195 aaKnown RBP3.02□□□□□ -1.93
RAP1B-224ENST00000541216 MARF1Q9Y4F3 1742 aaKnown RBP3.02□□□□□ -1.93
RAP1B-224ENST00000541216 RNF222A6NCQ9 220 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 ARHGAP42A6NI28 874 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 ZFP92A6NM28 416 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 ALOX15BO15296 676 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 HDAC3O15379 428 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 LYPD3O95274 346 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 H2AFZP0C0S5 128 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 ZP3P21754 424 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 SRYQ05066 204 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 PUDPQ08623 228 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 SNX1Q13596 522 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 GAMTQ14353 236 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 PDK1Q15118 436 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 TMEM26Q6ZUK4 368 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 RNF148Q8N7C7 305 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 ART4Q93070 314 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 C18orf25Q96B23 403 aaPredicted RBP3.01□□□□□ -1.93
RAP1B-224ENST00000541216 PHYHIPLQ96FC7 376 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 NSMCE2Q96MF7 247 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 ZIM3Q96PE6 472 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 MAPKAP1Q9BPZ7 522 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 WRAP53Q9BUR4 548 aaKnown RBP3.01□□□□□ -1.93
RAP1B-224ENST00000541216 PLSCR3Q9NRY6 295 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 DUS2Q9NX74 493 aaKnown RBP3.01□□□□□ -1.93
RAP1B-224ENST00000541216 NYAP2Q9P242 653 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 GHRLQ9UBU3 117 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 CLIP2Q9UDT6 1046 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 KLHL21Q9UJP4 597 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 CCPG1Q9ULG6 757 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 ARHGEF28Q8N1W1 1705 aaKnown RBP3.01□□□□□ -1.93
RAP1B-224ENST00000541216 CDC42BPBQ9Y5S2 1711 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 FYCO1Q9BQS8 1478 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 ADAMTS13Q76LX8 1427 aa3.01□□□□□ -1.93
RAP1B-224ENST00000541216 CNTNAP1P78357 1384 aa3□□□□□ -1.93
RAP1B-224ENST00000541216 UBE4BO95155 1302 aa3□□□□□ -1.93
RAP1B-224ENST00000541216 KCPQ6ZWJ8 1503 aa3□□□□□ -1.93
RAP1B-224ENST00000541216 LMTK2Q8IWU2 1503 aa3□□□□□ -1.93
RAP1B-224ENST00000541216 TTC26A0AVF1 554 aa3□□□□□ -1.93
RAP1B-224ENST00000541216 B4DXG7 233 aa3□□□□□ -1.93
RAP1B-224ENST00000541216 NOL4O94818 638 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms