RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 A0A1W2PQD3 144 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 AHRRA9YTQ3 701 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 PRSS44E7EML9 344 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 POLR3GO15318 223 aaPredicted RBP15.31■□□□□ 0.04
CD9-209ENST00000540891 NDUFB5O43674 189 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 TOXO94900 526 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 SOX30O94993 753 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 CLDN14O95500 239 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 IL6P05231 212 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 HOXD4P09016 255 aaPredicted RBP15.31■□□□□ 0.04
CD9-209ENST00000540891 PTGER4P35408 488 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 STARP49675 285 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 LHX2P50458 406 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 ZNF630Q2M218 657 aaPredicted RBP15.31■□□□□ 0.04
CD9-209ENST00000540891 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.31■□□□□ 0.04
CD9-209ENST00000540891 HEPHL1Q6MZM0 1159 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 OLIG3Q7RTU3 272 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 CCDC71Q8IV32 467 aaPredicted RBP15.31■□□□□ 0.04
CD9-209ENST00000540891 PANX1Q96RD7 426 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 SDF2Q99470 211 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 SLC35A5Q9BS91 424 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 ACBD3Q9H3P7 528 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 SLC6A13Q9NSD5 602 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 CAMK2AQ9UQM7 478 aa15.31■□□□□ 0.04
CD9-209ENST00000540891 A0A0G2JNJ9 132 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 CCDC154A6NI56 674 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 DUXAA6NLW8 204 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 C19orf84I3L1E1 186 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 GMFGO60234 142 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 EDF1O60869 148 aaKnown RBP15.3■□□□□ 0.04
CD9-209ENST00000540891 EPPINO95925 133 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 GSNP06396 782 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 OR12D1P0DN82 309 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 CPN1P15169 458 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 HK1P19367 917 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 ATP6V1C1P21283 382 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 HTR1EP28566 365 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 DCTP40126 519 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 FUT5Q11128 374 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 GANABQ14697 944 aaKnown RBP15.3■□□□□ 0.04
CD9-209ENST00000540891 ARHGAP11BQ3KRB8 267 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 KLHL26Q53HC5 615 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 ZNF787Q6DD87 383 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 TNFAIP8L2Q6P589 184 aaPredicted RBP15.3■□□□□ 0.04
CD9-209ENST00000540891 ARSKQ6UWY0 536 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 PM20D2Q8IYS1 436 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 MIER2Q8N344 545 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 SFXN2Q96NB2 322 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 PCNX3Q9H6A9 2034 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 COQ3Q9NZJ6 369 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 Q9UFV3 132 aa15.3■□□□□ 0.04
CD9-209ENST00000540891 PRAMEF27A3QJZ7 478 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 SCDO00767 359 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 OIP5O43482 229 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 FCMRO60667 390 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 ZNF708P17019 499 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 CHMP24386 653 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 CHI3L1P36222 383 aaPredicted RBP15.29■□□□□ 0.04
CD9-209ENST00000540891 RNF144AP50876 292 aaPredicted RBP15.29■□□□□ 0.04
CD9-209ENST00000540891 POLR2JP52435 117 aaKnown RBP15.29■□□□□ 0.04
CD9-209ENST00000540891 ATP12AP54707 1039 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 CLDN18P56856 261 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 LRRC74AQ0VAA2 488 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 TMEM44Q2T9K0 475 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 FLYWCH1Q4VC44 716 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 TIGD2Q4W5G0 525 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 ZNF621Q6ZSS3 439 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 RNF130Q86XS8 419 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 LIX1LQ8IVB5 337 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 FUNDC1Q8IVP5 155 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 OR5M1Q8NGP8 315 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 STON2Q8WXE9 905 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 RAB8BQ92930 207 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 VPS33AQ96AX1 596 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 DTNBP1Q96EV8 351 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 THOC1Q96FV9 657 aaKnown RBP15.29■□□□□ 0.04
CD9-209ENST00000540891 NPAS1Q99742 590 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 ZNF350Q9GZX5 532 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 PTGES2Q9H7Z7 377 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 KCNE5Q9UJ90 142 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 KIAA1549Q9HCM3 1950 aa15.29■□□□□ 0.04
CD9-209ENST00000540891 CENPVL1A0A0U1RR11 272 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 FAM234BA2RU67 622 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 OR2M5A3KFT3 312 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 RFXANKO14593 260 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 AK1P00568 194 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 HPGDP15428 266 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 CD1EP15812 388 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 CHRNB4P30926 498 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 GCKP35557 465 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 GTDC1Q4AE62 458 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 RIPPLY2Q5TAB7 128 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 RAET1LQ5VY80 246 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 NSUN5P2Q63ZY6 315 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 SP5Q6BEB4 398 aaPredicted RBP15.28■□□□□ 0.04
CD9-209ENST00000540891 AAGABQ6PD74 315 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 ENPP6Q6UWR7 440 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 DNAJC14Q6Y2X3 702 aaPredicted RBP15.28■□□□□ 0.04
CD9-209ENST00000540891 MSANTD1Q6ZTZ1 278 aa15.28■□□□□ 0.04
CD9-209ENST00000540891 ADGRE4PQ86SQ3 457 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms