RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 PDE4DIPQ5VU43 2346 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 PEX11BO96011 259 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 GASTP01350 101 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 OR8U8P0C7N1 319 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 FGF9P31371 208 aaPredicted RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 ADRA1AP35348 466 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 SOX18P35713 384 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 PNPLA4P41247 253 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 RAB4BP61018 213 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 ELAVL2Q12926 359 aaKnown RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 MAD2L1Q13257 205 aaPredicted RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 CDNFQ49AH0 187 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 KIAA1211LQ6NV74 962 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 RPL13AP3Q6NVV1 102 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 OR4C15Q8NGM1 316 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 OR1S2Q8NGQ3 325 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 PANX1Q96RD7 426 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 PIGQQ9BRB3 760 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 DOHHQ9BU89 302 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 IFT27Q9BW83 186 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 LRTM1Q9HBL6 345 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 NPDC1Q9NQX5 325 aaPredicted RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 RBM22Q9NW64 420 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 PRG3Q9Y2Y8 225 aaPredicted RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 MYLKQ15746 1914 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 CACNB4O00305 520 aaPredicted RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 SNAPC5O75971 98 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 AQP8O94778 261 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 CXCL10P02778 98 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 THP07101 528 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 PRSS56P0CW18 603 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 BCKDHAP12694 445 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 RBMS1P29558 406 aaKnown RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 HTR5AP47898 357 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 STARD6P59095 220 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 ILF3Q12906 894 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 COTL1Q14019 142 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 PPA1Q15181 289 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 OR52W1Q6IF63 320 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 NCEH1Q6PIU2 408 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 SPRED2Q7Z698 418 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 OAFQ86UD1 273 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 DTD1Q8TEA8 209 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 SUCNR1Q9BXA5 334 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 DERL2Q9GZP9 239 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 MFSD1Q9H3U5 465 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 KLHL31Q9H511 634 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 TMEM231Q9H6L2 316 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 UNKLQ9H9P5 680 aaKnown RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 TREM1Q9NP99 234 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 FZD3Q9NPG1 666 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 VSX1Q9NZR4 365 aaPredicted RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 PCDHB10Q9UN67 800 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 COL6A3P12111 3177 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 A0A0C4DFX4 3053 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 A0A0A6YYC8 382 aaPredicted RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 TRDV1A0A1B0GX56 115 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 GRXCR1A8MXD5 290 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 I3L1I5 382 aaPredicted RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 GABRPO00591 440 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 DVL2O14641 736 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 TLX2O43763 284 aaPredicted RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 RBBP9O75884 186 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 RPLP2P05387 115 aaKnown RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 CD2P06729 351 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 SRPRAP08240 638 aaKnown RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 HOXB8P17481 243 aaPredicted RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 CELP19835 753 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 NOS3P29474 1203 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 RFX3P48380 749 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 RNF144AP50876 292 aaPredicted RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 E2F1Q01094 437 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 ITKQ08881 620 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 TPBGQ13641 420 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 HEPACAMQ14CZ8 416 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 C9orf50Q5SZB4 431 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 RAB12Q6IQ22 244 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 TMEM71Q6P5X7 295 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 SEZ6L2Q6UXD5 910 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 ANGPTL8Q6UXH0 198 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 CEACAM20Q6UY09 585 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 ZNF511Q8NB15 262 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 CPNE2Q96FN4 548 aaPredicted RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 PCED1BQ96HM7 432 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 OR1F2PQ96R84 312 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 COPS8Q99627 209 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 PBX4Q9BYU1 374 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 TKTL2Q9H0I9 626 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 PRO1933Q9H354 126 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 WDCPQ9H6R7 721 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 KLHL1Q9NR64 748 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 TVP23BQ9NYZ1 205 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 A0A087X0M5 115 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 A0A1B0GX30 115 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 OR2M5A3KFT3 312 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 OR2T1O43869 369 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 DPM1O60762 260 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 MED6O75586 246 aa9.11□□□□□ -0.95
CLDN2-202ENST00000540876 FARS2O95363 451 aaKnown RBP9.11□□□□□ -0.95
CLDN2-202ENST00000540876 HLA-DQB2P05538 268 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms