RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 DEF8Q6ZN54 512 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 SLC29A4Q7RTT9 530 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 ZAR1Q86SH2 424 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 HS3ST5Q8IZT8 346 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 ZNF441Q8N8Z8 693 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 B3GNT7Q8NFL0 401 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 OR6T1Q8NGN1 323 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 VANGL1Q8TAA9 524 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 NR4A3Q92570 626 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 LPAR4Q99677 370 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 WDR77Q9BQA1 342 aaPredicted RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 WFDC6Q9BQY6 131 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 WWTR1Q9GZV5 400 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 NXF5Q9H1B4 397 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 SCOCQ9UIL1 159 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 KCNE5Q9UJ90 142 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 MRTO4Q9UKD2 239 aaKnown RBP13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 AP4B1Q9Y6B7 739 aa13.16□□□□□ -0.3
CYB561A3-216ENST00000540755 LOC102723996A0A087X1L8 192 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 IGHV3-20A0A0C4DH32 117 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 CENPVL1A0A0U1RR11 272 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 TEX51A0A1B0GUA7 166 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 A0A1W2PNU3 283 aaPredicted RBP13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 PMS2P1A4D2B8 440 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 NPIPB9F8W1W9 429 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 PEX12O00623 359 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 FFAR1O14842 300 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 SEMA7AO75326 666 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 KLF7O75840 302 aaPredicted RBP13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 CCNYL3P0C7X3 344 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 ITPKBP27987 946 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 LCN1P31025 176 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 CDH12P55289 794 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 SMIM11AP58511 58 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 NPTX1Q15818 432 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 ZNF141Q15928 474 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 NNATQ16517 81 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 ZSWIM7Q19AV6 140 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 TMEM164Q5U3C3 297 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 CLIP4Q8N3C7 705 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 APCDD1LQ8NCL9 501 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 OR2Y1Q8NGV0 311 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 PHF10Q8WUB8 498 aaKnown RBP13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 HSPBAP1Q96EW2 488 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 VMP1Q96GC9 406 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 PRRC1Q96M27 445 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 B3GNT4Q9C0J1 378 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 ARMC7Q9H6L4 198 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 ACER3Q9NUN7 267 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 PDP1Q9P0J1 537 aaPredicted RBP13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 PADI1Q9ULC6 663 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 A4GNTQ9UNA3 340 aa13.15□□□□□ -0.3
CYB561A3-216ENST00000540755 SDK2Q58EX2 2172 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 NPIPA5A0A0B4J1W7 369 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 CDHR4A6H8M9 788 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 NPIPA7E9PJI5 369 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 GADD45GO95257 159 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 IL33O95760 270 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 UMODP07911 640 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 RAB40ALP0C0E4 278 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 NPIPA8P0DM63 369 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 EIF2S3P41091 472 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 RFX3P48380 749 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 ATP12AP54707 1039 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 RGS8P57771 180 aaPredicted RBP13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 MERTKQ12866 999 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 GANABQ14697 944 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 RFX4Q33E94 735 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 MRPL2Q5T653 305 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 PIK3C3Q8NEB9 887 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 OR8K3Q8NH51 312 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 SNIP1Q8TAD8 396 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 NUBPLQ8TB37 319 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 GAL3ST4Q96RP7 486 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 BARD1Q99728 777 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 PSD2Q9BQI7 771 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 ADI1Q9BV57 179 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 HOXD1Q9GZZ0 328 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 SMURF2Q9HAU4 748 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 PTRH2Q9Y3E5 179 aaKnown RBP13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 ATMQ13315 3056 aa13.14□□□□□ -0.31
CYB561A3-216ENST00000540755 EXPH5Q8NEV8 1989 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 ARRDC5A6NEK1 342 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 IGHEP01854 428 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 H1F0P07305 194 aaKnown RBP13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 THRBP10828 461 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 PRKACGP22612 351 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 FOLR3P41439 243 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 SLC26A5P58743 744 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 RNF4P78317 190 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 FGFBP1Q14512 234 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 MICAQ29983 383 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 EXOC3L2Q2M3D2 409 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 C3orf38Q5JPI3 329 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 PDZK1Q5T2W1 519 aa13.13□□□□□ -0.31
CYB561A3-216ENST00000540755 C6orf52Q5T4I8 152 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms