RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PRR35P0CG20 571 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 APEHP13798 732 aaKnown RBP5.71□□□□□ -1.49
PTPRD-214ENST00000540109 GGT1P19440 569 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 RAB6AP20340 208 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 CDK2P24941 298 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 VIPR1P32241 457 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 SLC1A3P43003 542 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 GLP1RP43220 463 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 CDK5R2Q13319 367 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 EXOSC2Q13868 293 aaKnown RBP5.71□□□□□ -1.49
PTPRD-214ENST00000540109 RBM39Q14498 530 aaKnown RBP5.71□□□□□ -1.49
PTPRD-214ENST00000540109 GGTA1PQ4G0N0 100 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 PAQR3Q6TCH7 311 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 LRRC56Q8IYG6 542 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-214ENST00000540109 MDGA1Q8NFP4 955 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 OR6S1Q8NH40 331 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 CXorf40AQ8TE69 158 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 HPSE2Q8WWQ2 592 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 LIN37Q96GY3 246 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-214ENST00000540109 LRFN5Q96NI6 719 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 PIP5K1AQ99755 562 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 TCEAL2Q9H3H9 227 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-214ENST00000540109 HRH4Q9H3N8 390 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 AIG1Q9NVV5 245 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 RNF24Q9Y225 148 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 TSPAN11A1L157 253 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 SERTM1A2A2V5 107 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 DUXAA6NLW8 204 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 MAGEB17A8MXT2 336 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 RNF224P0DH78 156 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 ARSBP15848 533 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 NQO2P16083 231 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 ACRV1P26436 265 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 HTR3AP46098 478 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 AVPR1BP47901 424 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 SRP9P49458 86 aaKnown RBP5.71□□□□□ -1.49
PTPRD-214ENST00000540109 MTAPQ13126 283 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 ABLIM2Q6H8Q1 611 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 DOK6Q6PKX4 331 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 SSX7Q7RTT5 188 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 HS3ST5Q8IZT8 346 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 LINC00518Q8N0U6 118 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 LGI4Q8N135 537 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 NXPE1Q8N323 547 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 OR10H4Q8NGA5 316 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 RAB3CQ96E17 227 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 ALG14Q96F25 216 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 C5orf34Q96MH7 638 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 B3GNT4Q9C0J1 378 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 SAP130Q9H0E3 1048 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 GSKIPQ9P0R6 139 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 PCDHB9Q9Y5E1 797 aa5.71□□□□□ -1.49
PTPRD-214ENST00000540109 A0A087WZY1 265 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 A0A0G2JMP0 313 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 A6NIN4 97 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 RBBP9O75884 186 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 HBE1P02100 147 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 GIPP09681 153 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 RAB40ALP0C0E4 278 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 CAPN3P20807 821 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 OXTRP30559 389 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 AQP2P41181 271 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 MLLT10P55197 1068 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 SLAMF1Q13291 335 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 NFATC2Q13469 925 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 MEF2DQ14814 521 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 FAM174BQ3ZCQ3 159 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 C22orf39Q6P5X5 142 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ARL9Q6T311 187 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 GSG1LQ6UXU4 331 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 COMMD2Q86X83 199 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 FBXL6Q8N531 539 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 CHST4Q8NCG5 386 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 KREMEN2Q8NCW0 462 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 OR4M2Q8NGB6 313 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 NPRL2Q8WTW4 380 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 RAB40AQ8WXH6 277 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ATG10Q9H0Y0 220 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 KLHL9Q9P2J3 617 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 SCML1Q9UN30 329 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 KCTD3Q9Y597 815 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 LEUTXA8MZ59 168 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 NPIPB8E9PQR5 432 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 PPP1R2P9O14990 202 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 CBX7O95931 251 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ADH1CP00326 375 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 EBLN1P0CF75 366 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 SPI1P17947 270 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 OR2B8PP59922 312 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 UFM1P61960 85 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 POLR2GP62487 172 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ALKBH1Q13686 389 aaKnown RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 KIAA0141Q14154 515 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 CPSF6Q16630 551 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ZNF789Q5FWF6 425 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 ATXN7L2Q5T6C5 722 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-214ENST00000540109 H3F3CQ6NXT2 135 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 LILRA6Q6PI73 481 aa5.71□□□□□ -1.5
PTPRD-214ENST00000540109 SERPINA9Q86WD7 417 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms