RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CHST2Q9Y4C5 530 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 EIF4E1BA6NMX2 242 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CEACAM4O75871 244 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PRKD3O94806 890 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF682O95780 498 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 IFNA14P01570 189 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DBIP07108 87 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 IL7RP16871 459 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TBXA2RP21731 343 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 KCNJ5P48544 419 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ELOAQ14241 798 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TBR1Q16650 682 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 GLIPR1L2Q4G1C9 344 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 KLHL26Q53HC5 615 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 MTX3Q5HYI7 312 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF311Q5JNZ3 666 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 AGAP7PQ5VUJ5 663 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ENPP6Q6UWR7 440 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ISLR2Q6UXK2 745 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 APOOLQ6UXV4 268 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 COMTD1Q86VU5 262 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 EID3Q8N140 333 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF614Q8N883 585 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 EXTL1Q92935 676 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 AGAP4Q96P64 663 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 HOXD1Q9GZZ0 328 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RYDENQ9NUL5 291 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 HPF1Q9NWY4 346 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ADPRHL2Q9NX46 363 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RPS6KA6Q9UK32 745 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF443Q9Y2A4 671 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 IFT52Q9Y366 437 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 V9GYQ6 96 aa17.36■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TCRBV3S1A0A5B6 114 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 EPPINO95925 133 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 F10P00742 488 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 THBS1P07996 1170 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SELENOWP63302 87 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF836Q6ZNA1 936 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 VTCN1Q7Z7D3 282 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 POGLUT1Q8NBL1 392 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 GRHL3Q8TE85 626 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 APOBEC4Q8WW27 367 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TMCO6Q96DC7 493 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TPD52L3Q96J77 140 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF232Q9UNY5 417 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SAMD4AQ9UPU9 718 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DTNAQ9Y4J8 743 aa17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CHCHD2Q9Y6H1 151 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1A-213ENST00000540022 BAHCC1Q9P281 2608 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TLN1Q9Y490 2541 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SUV39H1O43463 412 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 FADS1O60427 444 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 WDPCPO95876 746 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 NGFRP08138 427 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 NID1P14543 1247 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PRKAR1BP31321 381 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 EVI2BP34910 448 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 HLCSP50747 726 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PLAURQ03405 335 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 LY6DQ14210 128 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 LARS2Q15031 903 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 LIN52Q52LA3 116 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DHRS4L2Q6PKH6 230 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF227Q86WZ6 799 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DND1Q8IYX4 353 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CLIP4Q8N3C7 705 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RNF138Q8WVD3 245 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RASSF5Q8WWW0 418 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RNF145Q96MT1 663 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PINK1Q9BXM7 581 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RTN4RQ9BZR6 473 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CACYBPQ9HB71 228 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PLA2G3Q9NZ20 509 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ABI3Q9P2A4 366 aa17.34■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SERINC4A6NH21 518 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SCDO00767 359 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ADAM10O14672 748 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ENTPD5O75356 428 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 BCAS1O75363 584 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 FESP07332 822 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 C8BP07358 591 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 HPGDP15428 266 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TNFRSF1BP20333 461 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CD96P40200 585 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CYB561P49447 251 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 EEF1A1P68104 462 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 KCNJ10P78508 379 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OC90Q02509 493 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 MFAP5Q13361 173 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TUBA3CQ13748 450 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 FGFBP1Q14512 234 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CD226Q15762 336 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 LINC00303Q3SY05 128 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 BICRALQ6AI39 1079 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TUBA3EQ6PEY2 450 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 MDGA2Q7Z553 956 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 MARCH3Q86UD3 253 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 GPALPP1Q8IXQ4 340 aa17.33■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ADGRG5Q8IZF4 528 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms