RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 AARSD1Q9BTE6 412 aaKnown RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 NKX6-2Q9C056 277 aaPredicted RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 SEMA4CQ9C0C4 833 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 LINC00597Q9H2U6 94 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 ACSS2Q9NR19 701 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 DYRK4Q9NR20 520 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SPHK2Q9NRA0 654 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SNTG1Q9NSN8 517 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 CLEC5AQ9NY25 188 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 BCAS2O75934 225 aaPredicted RBP11.81□□□□□ -0.52
DDX55-206ENST00000539934 F10P00742 488 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 PPBPP02775 128 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 FOLR2P14207 255 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 CA5AP35218 305 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 HTR5AP47898 357 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 TTPAP49638 278 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 PKIAP61925 76 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 BLOC1S1P78537 153 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 DUSP8Q13202 625 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 LY6G5CQ5SRR4 150 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 PSAPL1Q6NUJ1 521 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 ATRAIDQ6UW56 229 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 PIWIL4Q7Z3Z4 852 aaKnown RBP11.81□□□□□ -0.52
DDX55-206ENST00000539934 THOC6Q86W42 341 aaKnown RBP11.81□□□□□ -0.52
DDX55-206ENST00000539934 THNSL2Q86YJ6 484 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 ACBD4Q8NC06 268 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 LKAAEAR1Q8TD35 194 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 PAQR8Q8TEZ7 354 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 PIH1D2Q8WWB5 315 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 CMTM5Q96DZ9 223 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 MOCOSQ96EN8 888 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 MRI1Q9BV20 369 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 CLEC4MQ9H2X3 399 aaPredicted RBP11.81□□□□□ -0.52
DDX55-206ENST00000539934 FBXO34Q9NWN3 711 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 DHCR7Q9UBM7 475 aaKnown RBP11.81□□□□□ -0.52
DDX55-206ENST00000539934 SERGEFQ9UGK8 458 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 PLEKHA6Q9Y2H5 1048 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 CLDN16Q9Y5I7 305 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 WNT6Q9Y6F9 365 aa11.81□□□□□ -0.52
DDX55-206ENST00000539934 A0A0J9YYE9 177 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 URADA6NGE7 173 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 SPINT1O43278 529 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 OR10H2O60403 315 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 SORBS2O94875 1100 aaKnown RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 WDR47O94967 919 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 MED26O95402 600 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 TRBC1P01850 177 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 HSD11B1P28845 292 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 RAB5BP61020 215 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 SNRPEP62304 92 aaKnown RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 E2F1Q01094 437 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 BIKQ13323 160 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 MAB21L1Q13394 359 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 RBMS2Q15434 407 aaKnown RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 MED22Q15528 200 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 MOGAT2Q3SYC2 334 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 BCL7AQ4VC05 210 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 LPCAT3Q6P1A2 487 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 C22orf39Q6P5X5 142 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 TMEM207Q6UWW9 146 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 ZNF765Q7L2R6 523 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 TMEM145Q8NBT3 493 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 OR56A3Q8NH54 315 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 ELSPBP1Q96BH3 223 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 CCDC126Q96EE4 140 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 LMLNQ96KR4 655 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 ZFYVE1Q9HBF4 777 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 POPDC3Q9HBV1 291 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 TAS2R13Q9NYV9 303 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 IL17CQ9P0M4 197 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 HS3ST2Q9Y278 367 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 SLC9A8Q9Y2E8 581 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 RAP2CQ9Y3L5 183 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 NUP210Q8TEM1 1887 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 CXorf51AA0A1B0GTR3 108 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 PNMA8CA0A1B0GUJ8 204 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 AIPO00170 330 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 MMP20O60882 483 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 WISP3O95389 354 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 ZNF37AP17032 561 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 PVALBP20472 110 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 UQCRC2P22695 453 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 TLX1P31314 330 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 MSX2P35548 267 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 CEBPGP53567 150 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 RASGEF1BQ0VAM2 473 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 GK2Q14410 553 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 SF1Q15637 639 aaKnown RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 TATDN3Q17R31 274 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 PCGF3Q3KNV8 242 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 ARL13AQ5H913 290 aaPredicted RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 COLEC12Q5KU26 742 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 C9orf64Q5T6V5 341 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 PRAMEF13Q5VWM6 474 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 NRARPQ7Z6K4 114 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 C17orf47Q8NEP4 570 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 TCTEX1D2Q8WW35 142 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 CORO2AQ92828 525 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 MED8Q96G25 268 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms