RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 EVA1BQ9NVM1 165 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 POLHQ9Y253 713 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 SPEF1Q9Y4P9 236 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 CACNG2Q9Y698 323 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 CHD7Q9P2D1 2997 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 DOCK9Q9BZ29 2069 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 SCN2AQ99250 2005 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 IGKV1-8A0A0C4DH67 115 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 MAN2B1O00754 1011 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 CHST10O43529 356 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 RGS9O75916 674 aaPredicted RBP18.94■□□□□ 0.62
TMEM260-203ENST00000539559 EN2P19622 333 aaPredicted RBP18.94■□□□□ 0.62
TMEM260-203ENST00000539559 GCGRP47871 477 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 CCR6P51684 374 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 LYPD4Q6UWN0 246 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 AMZ2Q86W34 360 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 ING5Q8WYH8 240 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 CHFRQ96EP1 664 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 ALG8Q9BVK2 526 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 CXorf51AA0A1B0GTR3 108 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 SCAMP1O15126 338 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 SLC22A5O76082 557 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 IGHA1P01876 353 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 HTR1FP30939 366 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 THBS2P35442 1172 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 TALDO1P37837 337 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 CSNK1G2P78368 415 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 C6orf132Q5T0Z8 1188 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 TEX261Q6UWH6 196 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 CXXC5Q7LFL8 322 aaKnown RBP18.93■□□□□ 0.62
TMEM260-203ENST00000539559 DGLUCYQ7Z3D6 616 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 ZNF680Q8NEM1 530 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 OR10H4Q8NGA5 316 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 OR9A2Q8NGT5 310 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 NXPE3Q969Y0 559 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 DHRS9Q9BPW9 319 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 U3KQ87 197 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 LINC01553A4QN01 128 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 ERI3O43414 337 aaKnown RBP18.93■□□□□ 0.62
TMEM260-203ENST00000539559 MOSPD3O75425 235 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 GIFP27352 417 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 ACVR1BP36896 505 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 IFNGR2P38484 337 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 RGS8P57771 180 aaPredicted RBP18.93■□□□□ 0.62
TMEM260-203ENST00000539559 ST3GAL3Q11203 375 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 FGFBP1Q14512 234 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 AGERQ15109 404 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 ZFP3Q96NJ6 502 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 MCHR1Q99705 422 aa18.93■□□□□ 0.62
TMEM260-203ENST00000539559 DPCDQ9BVM2 203 aaPredicted RBP18.93■□□□□ 0.62
TMEM260-203ENST00000539559 EXOGQ9Y2C4 368 aaKnown RBP18.93■□□□□ 0.62
TMEM260-203ENST00000539559 SNRNP200O75643 2136 aaKnown RBP18.92■□□□□ 0.62
TMEM260-203ENST00000539559 CENPVL1A0A0U1RR11 272 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 LRIT2A6NDA9 550 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 AHCYP23526 432 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 CLCNKAP51800 687 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 PDX1P52945 283 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 ZNF620Q6ZNG0 422 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 GDF7Q7Z4P5 450 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 OR52N1Q8NH53 320 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 TTC9Q92623 222 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 GHITMQ9H3K2 345 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 SYNPO2LQ9H987 977 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 FOLH1BQ9HBA9 442 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 WASH6PQ9NQA3 447 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 ASB6Q9NWX5 421 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 GLTPQ9NZD2 209 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 ING4Q9UNL4 249 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 NOTCH4Q99466 2003 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 A0A0G2JPF8 293 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 SLC9B1P1A6NJY1 282 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 HNRNPCL2B2RXH8 293 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 HNRNPCL3B7ZW38 293 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 TOXO94900 526 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 HNRNPCL4P0DMR1 293 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 HK1P19367 917 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 PITPNBP48739 271 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 TGM3Q08188 693 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 HBMQ6B0K9 141 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 GLRX5Q86SX6 157 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 C17orf47Q8NEP4 570 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 OR5K2Q8NHB8 316 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 OSTF1Q92882 214 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 GPR137Q96N19 417 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 MENTQ9BUN1 341 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 DPH1Q9BZG8 443 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 PIGUQ9H490 435 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 PELI2Q9HAT8 420 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 B3GNT2Q9NY97 397 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 IL20Q9NYY1 176 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 SLC7A7Q9UM01 511 aa18.92■□□□□ 0.62
TMEM260-203ENST00000539559 C17orf113A0A1B0GUU1 675 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 I3L521 148 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 CASC3O15234 703 aaKnown RBP18.91■□□□□ 0.62
TMEM260-203ENST00000539559 MAGEB4O15481 346 aaPredicted RBP18.91■□□□□ 0.62
TMEM260-203ENST00000539559 PCCBP05166 539 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 ZGLP1P0C6A0 271 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 EPCAMP16422 314 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 STOMP27105 288 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 BICRALQ6AI39 1079 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms