RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CCDC85BQ15834 202 aaPredicted RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 C18orf63Q68DL7 685 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 HEPHL1Q6MZM0 1159 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 B3GLCTQ6Y288 498 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ASB18Q6ZVZ8 466 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 C16orf62Q7Z3J2 963 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 AMIGO1Q86WK6 493 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 SAMD12Q8N8I0 201 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 OR2L5Q8NG80 312 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 OR51G2Q8NGK0 314 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 SUN5Q8TC36 379 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 BRIX1Q8TDN6 353 aaKnown RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 TMEM255BQ8WV15 326 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 MARVELD3Q96A59 401 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 SLC35A4Q96G79 324 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ZNF681Q96N22 645 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ALG8Q9BVK2 526 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 LGR4Q9BXB1 951 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 C1QTNF2Q9BXJ5 285 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 CFHR5Q9BXR6 569 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 RANBP3Q9H6Z4 567 aaPredicted RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 MTHFD2LQ9H903 347 aaPredicted RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 KRCC1Q9NPI7 259 aaPredicted RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 PCDH10Q9P2E7 1040 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 A0A1W2PQ72 361 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 A0A1W2PS29 197 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 DUXAA6NLW8 204 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 CDC42EP2O14613 210 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 SHOXO15266 292 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 PLPP2O43688 288 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 FCMRO60667 390 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 ICMTO60725 284 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 SOX30O94993 753 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 ZGLP1P0C6A0 271 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 PAICSP22234 425 aaKnown RBP9.01□□□□□ -0.97
CDH13-204ENST00000539548 BTCP35070 178 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 AHRP35869 848 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 MC3RP41968 323 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 RAB28P51157 221 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 ERVK-21P61565 698 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 MESP2Q0VG99 397 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 GALEQ14376 348 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 NTRK2Q16620 822 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 CCNJQ5T5M9 372 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 ZBTB37Q5TC79 503 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 PYHIN1Q6K0P9 492 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 ANKRD54Q6NXT1 300 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 NIPAL3Q6P499 406 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 PLBD1Q6P4A8 553 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 RTL10Q7L3V2 364 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 GET4Q7L5D6 327 aaPredicted RBP9.01□□□□□ -0.97
CDH13-204ENST00000539548 CCDC28AQ8IWP9 274 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 GPR135Q8IZ08 494 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 OR2L8Q8NGY9 312 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 OR5W2Q8NH69 310 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 GIMAP5Q96F15 307 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 LRRC3BQ96PB8 259 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
CDH13-204ENST00000539548 MACROD1Q9BQ69 325 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 TRMT61BQ9BVS5 477 aaKnown RBP9.01□□□□□ -0.97
CDH13-204ENST00000539548 PPIL3Q9H2H8 161 aaKnown RBP9.01□□□□□ -0.97
CDH13-204ENST00000539548 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 EQTNQ9NQ60 294 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 TRIM36Q9NQ86 728 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 INPP5EQ9NRR6 644 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 PTTG3PQ9NZH4 202 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 IL20RAQ9UHF4 553 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 KLF15Q9UIH9 416 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 ELF5Q9UKW6 265 aaPredicted RBP9.01□□□□□ -0.97
CDH13-204ENST00000539548 TBX21Q9UL17 535 aa9.01□□□□□ -0.97
CDH13-204ENST00000539548 MUC22E2RYF6 1773 aaPredicted RBP9.01□□□□□ -0.97
CDH13-204ENST00000539548 MDC1Q14676 2089 aaKnown RBP9□□□□□ -0.97
CDH13-204ENST00000539548 DAPL1A0PJW8 107 aa9□□□□□ -0.97
CDH13-204ENST00000539548 LINC00862A6NCI5 91 aa9□□□□□ -0.97
CDH13-204ENST00000539548 UNC119BA6NIH7 251 aa9□□□□□ -0.97
CDH13-204ENST00000539548 FAM183AA6NL82 134 aa9□□□□□ -0.97
CDH13-204ENST00000539548 ADH1CP00326 375 aa9□□□□□ -0.97
CDH13-204ENST00000539548 STATHP02808 62 aa9□□□□□ -0.97
CDH13-204ENST00000539548 M6PRP20645 277 aa9□□□□□ -0.97
CDH13-204ENST00000539548 STOMP27105 288 aa9□□□□□ -0.97
CDH13-204ENST00000539548 TSFMP43897 325 aaKnown RBP9□□□□□ -0.97
CDH13-204ENST00000539548 GCGRP47871 477 aa9□□□□□ -0.97
CDH13-204ENST00000539548 PDX1P52945 283 aa9□□□□□ -0.97
CDH13-204ENST00000539548 AP2S1P53680 142 aaPredicted RBP9□□□□□ -0.97
CDH13-204ENST00000539548 PER3P56645 1201 aa9□□□□□ -0.97
CDH13-204ENST00000539548 NTHL1P78549 312 aa9□□□□□ -0.97
CDH13-204ENST00000539548 NUMA1Q14980 2115 aa9□□□□□ -0.97
CDH13-204ENST00000539548 MLF2Q15773 248 aaPredicted RBP9□□□□□ -0.97
CDH13-204ENST00000539548 PUS10Q3MIT2 529 aaKnown RBP9□□□□□ -0.97
CDH13-204ENST00000539548 SLC36A2Q495M3 483 aa9□□□□□ -0.97
CDH13-204ENST00000539548 TCEAL5Q5H9L2 206 aa9□□□□□ -0.97
CDH13-204ENST00000539548 BCL2L15Q5TBC7 163 aa9□□□□□ -0.97
CDH13-204ENST00000539548 CD276Q5ZPR3 534 aa9□□□□□ -0.97
CDH13-204ENST00000539548 SFXN4Q6P4A7 337 aa9□□□□□ -0.97
CDH13-204ENST00000539548 FRRS1Q6ZNA5 592 aa9□□□□□ -0.97
CDH13-204ENST00000539548 ETFBKMTQ8IXQ9 262 aa9□□□□□ -0.97
CDH13-204ENST00000539548 SRFBP1Q8NEF9 429 aaKnown RBP9□□□□□ -0.97
CDH13-204ENST00000539548 OR8H1Q8NGG4 311 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms