RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OR13C2Q8NGS9 318 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LKAAEAR1Q8TD35 194 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 NUDCD2Q8WVJ2 157 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ARNTL2Q8WYA1 636 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ADIPOR1Q96A54 375 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM45BQ96B21 275 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 FAF2Q96CS3 445 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SMIM10Q96HG1 83 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SEC22AQ96IW7 307 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ANKRD27Q96NW4 1050 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 DEFB118Q96PH6 123 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PSKH2Q96QS6 385 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 HBEGFQ99075 208 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PRRG4Q9BZD6 226 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OCR1Q9BZK8 76 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 STRADBQ9C0K7 418 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZBP1Q9H171 429 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MOB1AQ9H8S9 216 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 KCNK13Q9HB14 408 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ABCC13Q9NSE7 274 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 NRBP2Q9NSY0 501 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 DDX18Q9NVP1 670 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TMOD3Q9NYL9 352 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LNPEPQ9UIQ6 1025 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 IKZF3Q9UKT9 509 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PLA2G4CQ9UP65 541 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TNFRSF18Q9Y5U5 241 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 KIF21BO75037 1637 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CROCCQ5TZA2 2017 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 KIAA0586Q9BVV6 1533 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TRAV26-1A0A087WT03 109 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 IGHV2-70DA0A0C4DH43 119 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OR2AG2A6NM03 316 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GABRR3A8MPY1 467 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SRRM5B3KS81 715 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 H0YIV9 168 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 IMPA2O14732 288 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TOM1L1O75674 476 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 AMBPP02760 352 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 FHP07954 510 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MCF2P10911 925 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PAICSP22234 425 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 UQCRC2P22695 453 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CTNNA2P26232 953 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GNL1P36915 607 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ID1P41134 155 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ERFP50548 548 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 RAB9AP51151 201 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SGSHP51688 502 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ERVPABLB-1P60509 514 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SNTB2Q13425 540 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TMED1Q13445 227 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 KLF5Q13887 457 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 VGLL4Q14135 290 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GCKRQ14397 625 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MLF2Q15773 248 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CHI3L2Q15782 390 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 DUSP5Q16690 384 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 KNOP1Q1ED39 458 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SFT2D3Q587I9 215 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ATP1A1-AS1Q5TC04 95 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 WDR25Q64LD2 544 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 VASH2Q86V25 355 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LCA5Q86VQ0 697 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PARP8Q8N3A8 854 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OR7A2PQ8NGA2 310 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OR4F17Q8NGA8 305 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OR4F5Q8NH21 305 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OR52J3Q8NH60 311 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SLC2A14Q8TDB8 520 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM37Q8WXS4 190 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 BIRC7Q96CA5 298 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OR4F4Q96R69 305 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CCT7Q99832 543 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 AGPAT1Q99943 283 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SYT15Q9BQS2 421 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PAXXQ9BUH6 204 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ST6GALNAC5Q9BVH7 336 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 NUP58Q9BVL2 599 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 DDX47Q9H0S4 455 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 RAB17Q9H0T7 212 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 BICC1Q9H694 974 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GORASP2Q9H8Y8 452 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 IL26Q9NPH9 171 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZCCHC3Q9NUD5 404 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 AGPAT5Q9NUQ2 364 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MRPL39Q9NYK5 338 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ADAM22Q9P0K1 906 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ERVK-18Q9QC07 812 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 BARX2Q9UMQ3 279 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GAB2Q9UQC2 676 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CSAG2Q9Y5P2 127 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SALL1Q9NSC2 1324 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 IGHV7-81A0A0B4J1V7 117 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GPR89AB7ZAQ6 455 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LGALS8O00214 317 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 OR7A17O14581 309 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CASQ2O14958 399 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MSH4O15457 936 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PEX11AO75192 247 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms