RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SS18L1O75177 396 aaPredicted RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 HEXAP06865 529 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 ACP2P11117 423 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 NEFHP12036 1026 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 CPA3P15088 417 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 CRHR1P34998 444 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 FRKP42685 505 aaPredicted RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 EIF1AXP47813 144 aaKnown RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 SLC6A8P48029 635 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 CCT5P48643 541 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 CTU2Q2VPK5 515 aaKnown RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 LIPMQ5VYY2 423 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 MFSD12Q6NUT3 480 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 CLEC9AQ6UXN8 241 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 C20orf204Q6ZNR8 217 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 RNF165Q6ZSG1 346 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 Q6ZSR9 355 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 ZAR1Q86SH2 424 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 P3H2Q8IVL5 708 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 GTPBP8Q8N3Z3 284 aaPredicted RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 CCDC63Q8NA47 563 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 NUP43Q8NFH3 380 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 OR6K3Q8NGY3 331 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 OR4C3Q8NH37 302 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 OR10D3Q8NH80 312 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 CEP70Q8NHQ1 597 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 FBXO30Q8TB52 745 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 FAM110BQ8TC76 370 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 SLC9A6Q92581 669 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 PPCDCQ96CD2 204 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 ZBED6CLQ96FA7 236 aaPredicted RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 ZC3HAV1LQ96H79 300 aaKnown RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 GMPPAQ96IJ6 420 aaPredicted RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 COX4I2Q96KJ9 171 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 MS4A4EQ96PG1 132 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 TSSK3Q96PN8 268 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 NPAS1Q99742 590 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 REEP4Q9H6H4 257 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF395Q9H8N7 513 aaPredicted RBP11.22□□□□□ -0.61
VAMP1-206ENST00000538970 HHATLQ9HCP6 504 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 NTMQ9P121 344 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 EMC9Q9Y3B6 208 aa11.22□□□□□ -0.61
VAMP1-206ENST00000538970 COPEO14579 308 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 AZIN1O14977 448 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 AKAP10O43572 662 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 NDUFB5O43674 189 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 KCNK2O95069 426 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 THBDP07204 575 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 TBXA2RP21731 343 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PSMA4P25789 261 aaKnown RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PRKAG1P54619 331 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 RPL38P63173 70 aaKnown RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PCLAFQ15004 111 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 DUSP5Q16690 384 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 EXOC3L2Q2M3D2 409 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PLPPR5Q32ZL2 321 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 RFTN2Q52LD8 501 aaPredicted RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 EXOSC6Q5RKV6 272 aaKnown RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 KANK2Q63ZY3 851 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 ANKRD34AQ69YU3 496 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PPP4R4Q6NUP7 873 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 FIGNL1Q6PIW4 674 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 SZRD1Q7Z422 152 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 TDRPQ86YL5 185 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 WDR75Q8IWA0 830 aaKnown RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 GATSQ8NAP1 163 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 SLC16A11Q8NCK7 471 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 LRRN4CLQ8ND94 238 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 CLHC1Q8NHS4 586 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 KIF18AQ8NI77 898 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PPP1R14CQ8TAE6 165 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 NUDT8Q8WV74 236 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 ZBTB8AQ96BR9 441 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PRRG4Q9BZD6 226 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 KLHL4Q9C0H6 718 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 IQCGQ9H095 443 aaKnown RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 TUBB1Q9H4B7 451 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PLSCR4Q9NRQ2 329 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 ACSS1Q9NUB1 689 aaPredicted RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 PAQR5Q9NXK6 330 aaPredicted RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 STOML1Q9UBI4 398 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 MCTS1Q9ULC4 181 aaKnown RBP11.21□□□□□ -0.61
VAMP1-206ENST00000538970 CLEC4AQ9UMR7 237 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 FIS1Q9Y3D6 152 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 JMJD1CQ15652 2540 aa11.21□□□□□ -0.61
VAMP1-206ENST00000538970 RAI1Q7Z5J4 1906 aaPredicted RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 A0A1W2PRB8 838 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 FAM171A2A8MVW0 826 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 LSM1O15116 133 aaKnown RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 ADAMDEC1O15204 470 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 PLGP00747 810 aaPredicted RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 PPP3CBP16298 524 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 KRT4P19013 534 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 IL11P20809 199 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 LCN1P31025 176 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 ZNF41P51814 821 aaPredicted RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 MANFP55145 182 aaKnown RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 CTBP2P56545 445 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 RAC1P63000 192 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms