RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 C1orf210Q8IVY1 113 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 GALNT15Q8N3T1 639 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 D2HGDHQ8N465 521 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 TMEM105Q8N8V8 129 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 DNAJA3Q96EY1 480 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 ENKD1Q9H0I2 346 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 VCX3AQ9NNX9 186 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 PSORS1C1Q9UIG5 152 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 OR10H1Q9Y4A9 318 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 TNRC6BQ9UPQ9 1833 aaKnown RBP13.07□□□□□ -0.32
ACTN1-205ENST00000538545 CACNA1HO95180 2353 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 A0A1B0GTQ1 180 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 FITM1A5D6W6 292 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 ZNF99A8MXY4 864 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-205ENST00000538545 DCKP27707 260 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 ST3GAL3Q11203 375 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 ILKQ13418 452 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 OR1Q1Q15612 314 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 C1orf94Q6P1W5 598 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 KANSL1Q7Z3B3 1105 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 EDAQ92838 391 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 FKBP10Q96AY3 582 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 ZNF501Q96CX3 271 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-205ENST00000538545 PSD2Q9BQI7 771 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 AKIRIN1Q9H9L7 192 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-205ENST00000538545 NLGN3Q9NZ94 848 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 KNTC1P50748 2209 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 MED12Q93074 2177 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 ADAMTS20P59510 1910 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 JUNBP17275 347 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-205ENST00000538545 TRAM2Q15035 370 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 ARHGAP40Q5TG30 622 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 PRPF38BQ5VTL8 546 aaKnown RBP13.06□□□□□ -0.32
ACTN1-205ENST00000538545 C16orf47Q6ZP98 133 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-205ENST00000538545 SLC16A12Q6ZSM3 486 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 GAB3Q8WWW8 586 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 RORBQ92753 470 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 GAL3ST4Q96RP7 486 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 STACQ99469 402 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 CTRCQ99895 268 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 PRSS27Q9BQR3 290 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 NDC1Q9BTX1 674 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 DPH1Q9BZG8 443 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 RAB33BQ9H082 229 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 ERVMER34-1Q9H9K5 563 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 MKL2Q9ULH7 1088 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 IFT52Q9Y366 437 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 CLCA1A8K7I4 914 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 RFPL3O75679 317 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 SLC2A10O95528 541 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 OXSR1O95747 527 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-205ENST00000538545 AGR2O95994 175 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 PTHP01270 115 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 RPS4Y1P22090 263 aaKnown RBP13.06□□□□□ -0.32
ACTN1-205ENST00000538545 OMPP47874 163 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 CXCR4P61073 352 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 SPCS2Q15005 226 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 SOWAHCQ53LP3 525 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-205ENST00000538545 GARNL3Q5VVW2 1013 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 PAQR6Q6TCH4 344 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 B3GLCTQ6Y288 498 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 SHFQ7M4L6 423 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 ZNF615Q8N8J6 731 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 ZSCAN1Q8NBB4 408 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 SLC41A2Q96JW4 573 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 OR6C1Q96RD1 312 aa13.06□□□□□ -0.32
ACTN1-205ENST00000538545 ARRDC5A6NEK1 342 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 DBIP07108 87 aaKnown RBP13.05□□□□□ -0.32
ACTN1-205ENST00000538545 HSMCR30P0CW71 290 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 CKMT1AP12532 417 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 GIPRP48546 466 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 SMIM11AP58511 58 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 IGLV3-21P80748 117 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-205ENST00000538545 NSDHLQ15738 373 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 SIGLEC11Q96RL6 698 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 PRDM9Q9NQV7 894 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 SLC22A11Q9NSA0 550 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 CLEC2DQ9UHP7 191 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 CSNK1G3Q9Y6M4 447 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 MN1Q10571 1320 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-205ENST00000538545 LRRN3E7EW58 273 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 H0YIG0 161 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 MAGEA8P43361 318 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 HSD17B7P56937 341 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 GPLD1P80108 840 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 SIGLEC14Q08ET2 396 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 ZNHIT3Q15649 155 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-205ENST00000538545 TRIM61Q5EBN2 209 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 CASP12Q6UXS9 341 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 CADM2Q8N3J6 435 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 STX19Q8N4C7 294 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 BCORP1Q8N888 145 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 OR5M11Q96RB7 305 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 CD180Q99467 661 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 SLC7A5P2Q9GIP4 190 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 NXF5Q9H1B4 397 aaKnown RBP13.05□□□□□ -0.32
ACTN1-205ENST00000538545 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
ACTN1-205ENST00000538545 CACYBPQ9HB71 228 aaKnown RBP13.05□□□□□ -0.32
ACTN1-205ENST00000538545 ZNF304Q9HCX3 659 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms