RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 RNF121Q9H920 327 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 SRA1Q9HD15 236 aaKnown RBP6.68□□□□□ -1.34
MSH6-209ENST00000538136 SLC6A13Q9NSD5 602 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 TINAGQ9UJW2 476 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 PCDHGA3Q9Y5H0 932 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 PTPRDP23468 1912 aa6.68□□□□□ -1.34
MSH6-209ENST00000538136 A0A1W2PNU3 283 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 PDLIM1O00151 329 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CASKO14936 926 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 DNAJC8O75937 253 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 ABCD3P28288 659 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 ADSLP30566 484 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 MEOX1P50221 254 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 ESRRGP62508 458 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 TLE3Q04726 772 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 C1QL3Q5VWW1 255 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 SLC6A19Q695T7 634 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 KLHL24Q6TFL4 600 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 B3GLCTQ6Y288 498 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 ZAR1Q86SH2 424 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CYB561A3Q8NBI2 242 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 ADAMTS18Q8TE60 1221 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 RASL10BQ96S79 203 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 VCXQ9H320 206 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 BOKQ9UMX3 212 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 COL4A4P53420 1690 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 FN1P02751 2386 aaKnown RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 TRAV17A0A0B4J275 112 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 A0A1B0GTH9 108 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CXorf51AA0A1B0GTR3 108 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 VSTM2BA6NLU5 285 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 H7C1C5 153 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 HSMCR30P0CW71 290 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 HSD3B1P14060 373 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 UQCRC2P22695 453 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 HSD3B2P26439 372 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 GDI2P50395 445 aaKnown RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 LCN6P62502 163 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 GALK2Q01415 458 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 ZFP36L1Q07352 338 aaKnown RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 CLN3Q13286 438 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 MRPL49Q13405 166 aaKnown RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 MADCAM1Q13477 382 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 DNAL1Q4LDG9 190 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 MRPL2Q5T653 305 aaKnown RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 SLC25A25Q6KCM7 469 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CARM1Q86X55 608 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CCDC103Q8IW40 242 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CANT1Q8WVQ1 401 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 MS4A4EQ96PG1 132 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 IL4I1Q96RQ9 567 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CIB1Q99828 191 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 FAM120CQ9NX05 1096 aaKnown RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 J3KTA2 159 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 PSMD9O00233 223 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CCL21O00585 134 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 KCNJ10P78508 379 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 RBPJQ06330 500 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 PRTGQ2VWP7 1150 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 REEP3Q6NUK4 255 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CASP12Q6UXS9 341 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 NUP54Q7Z3B4 507 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 PRSS42Q7Z5A4 293 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 RANBP3LQ86VV4 465 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 GLB1L3Q8NCI6 653 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 CA5BP1Q8WTZ4 195 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 C3orf49Q96BT1 292 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 ZHX1-C8orf76Q96EF9 292 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 LIN37Q96GY3 246 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 TREX2Q9BQ50 279 aaPredicted RBP6.67□□□□□ -1.34
MSH6-209ENST00000538136 IFT27Q9BW83 186 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 BRF2Q9HAW0 419 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 CNIH4Q9P003 139 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 ASB4Q9Y574 426 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 MAST4O15021 2626 aa6.67□□□□□ -1.34
MSH6-209ENST00000538136 B4E171 279 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 FOXE1O00358 373 aaPredicted RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 SOCS2O14508 198 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SNPHO15079 494 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 UGDHO60701 494 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 CNOT3O75175 753 aaKnown RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 SEMA3DO95025 777 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 COL8A1P27658 744 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SERPINB1P30740 379 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 TSPAN7P41732 249 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 NUBP1P53384 320 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 PMS2P3Q13401 168 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 EXT1Q16394 746 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 LRRC74BQ6ZQY2 392 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 LILRA2Q8N149 483 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 PIAS4Q8N2W9 510 aaPredicted RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 WDR60Q8WVS4 1066 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SLC35A4Q96G79 324 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SIGLEC12Q96PQ1 595 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 CDADC1Q9BWV3 514 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 HEATR1Q9H583 2144 aaKnown RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 DDX31Q9H8H2 851 aaKnown RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 PDP1Q9P0J1 537 aaPredicted RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 PCDHGB2Q9Y5G2 931 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 KALRNO60229 2985 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms