RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 CD3GP09693 182 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 HNRNPCL4P0DMR1 293 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 EPCAMP16422 314 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ATP6V1E1P36543 226 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 CCR6P51684 374 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ARPC4P59998 168 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 CDK3Q00526 305 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
CLPB-209ENST00000538039 MRM1Q6IN84 353 aaKnown RBP13.12□□□□□ -0.31
CLPB-209ENST00000538039 ABHD17CQ6PCB6 329 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ERN2Q76MJ5 926 aaKnown RBP13.12□□□□□ -0.31
CLPB-209ENST00000538039 OR7G2Q8NG99 324 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 OR6C4Q8NGE1 309 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ORAI1Q96D31 301 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 LRIG1Q96JA1 1093 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 FERD3LQ96RJ6 166 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 MCHR1Q99705 422 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 PRSS27Q9BQR3 290 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ABCG5Q9H222 651 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 GHITMQ9H3K2 345 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 NARFLQ9H6Q4 476 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 BEX1Q9HBH7 125 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLPB-209ENST00000538039 MARK1Q9P0L2 795 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 TP53BP1Q12888 1972 aaPredicted RBP13.12□□□□□ -0.31
CLPB-209ENST00000538039 SPTBP11277 2137 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 LOC105371267A0A1B0GV96 52 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 GYPBP06028 91 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 PEPDP12955 493 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
CLPB-209ENST00000538039 ATP5A1P25705 553 aaKnown RBP13.12□□□□□ -0.31
CLPB-209ENST00000538039 HTR2AP28223 471 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ACVR1BP36896 505 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ZNF136P52737 540 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 PRDX1Q06830 199 aaKnown RBP13.12□□□□□ -0.31
CLPB-209ENST00000538039 ZIC1Q15915 447 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ANKRD54Q6NXT1 300 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 ARL9Q6T311 187 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 FRRS1Q6ZNA5 592 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 KCT2Q8NC54 265 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 AKAP1Q92667 903 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLPB-209ENST00000538039 CDS1Q92903 461 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 SLC41A3Q96GZ6 507 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 COQ3Q9NZJ6 369 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 SERGEFQ9UGK8 458 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 KCNE5Q9UJ90 142 aa13.12□□□□□ -0.31
CLPB-209ENST00000538039 A0A087WV48 116 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 A0A1W2PQ72 361 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ADH5P11766 374 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 GCGRP47871 477 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 TGM3Q08188 693 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 KRT74Q7RTS7 529 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 FAM109AQ8N4B1 249 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ZNF655Q8N720 491 aaPredicted RBP13.11□□□□□ -0.31
CLPB-209ENST00000538039 GCDHQ92947 438 aaPredicted RBP13.11□□□□□ -0.31
CLPB-209ENST00000538039 PPP1R16AQ96I34 528 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ALG8Q9BVK2 526 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 TEKT2Q9UIF3 430 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 SYNDIG1LA6NDD5 238 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ORC5O43913 435 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 VEGFDO43915 354 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 RFPL3O75679 317 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ADRB1P08588 477 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 F3P13726 295 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ZNF250P15622 560 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 FPR3P25089 353 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 SSTR2P30874 369 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 PLAURQ03405 335 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 SLC3A1Q07837 685 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ACSM1Q08AH1 577 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 MAB21L1Q13394 359 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ZNF234Q14588 700 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 SLC9A5Q14940 896 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
CLPB-209ENST00000538039 STPG1Q5TH74 334 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 METAP1DQ6UB28 335 aaPredicted RBP13.11□□□□□ -0.31
CLPB-209ENST00000538039 CXXC5Q7LFL8 322 aaKnown RBP13.11□□□□□ -0.31
CLPB-209ENST00000538039 PRSS45Q7RTY3 260 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 SIX5Q8N196 739 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 CYB561A3Q8NBI2 242 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 OR5M3Q8NGP4 307 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 PIGXQ8TBF5 258 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 THAP4Q8WY91 577 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 CXXC1Q9P0U4 656 aaPredicted RBP13.11□□□□□ -0.31
CLPB-209ENST00000538039 LTBP2Q14767 1821 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 SLC9B1P1A6NJY1 282 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 CASC3O15234 703 aaKnown RBP13.11□□□□□ -0.31
CLPB-209ENST00000538039 AHCYP23526 432 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ADAM15Q13444 863 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 TMEFF1Q8IYR6 380 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 ARL14Q8N4G2 192 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 OR8H1Q8NGG4 311 aa13.11□□□□□ -0.31
CLPB-209ENST00000538039 OR52N1Q8NH53 320 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms