RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 C1orf109Q9NX04 203 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 TAS2R7Q9NYW3 318 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 COQ3Q9NZJ6 369 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 SLC17A7Q9P2U7 560 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 SPRR3Q9UBC9 169 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.42□□□□□ -1.38
YBX3-206ENST00000536823 C15orf41Q9Y2V0 281 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 CCL27Q9Y4X3 112 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 POLR3HQ9Y535 204 aaPredicted RBP6.42□□□□□ -1.38
YBX3-206ENST00000536823 FAM215AQ9Y5M1 114 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 PTGDR2Q9Y5Y4 395 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 V9GYY5 206 aaPredicted RBP6.42□□□□□ -1.38
YBX3-206ENST00000536823 ARHGAP21Q5T5U3 1957 aa6.42□□□□□ -1.38
YBX3-206ENST00000536823 PDZD2O15018 2839 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 A0A087WV62 115 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 OR6C70A6NIJ9 312 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 FAM47E-STBD1D6RA91 191 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 WDR1O75083 606 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 COQ9O75208 318 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 UGT2B11O75310 529 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 SPAG7O75391 227 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 SEC22BO75396 215 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 ERN1O75460 977 aaKnown RBP6.41□□□□□ -1.38
YBX3-206ENST00000536823 PSMG1O95456 288 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 CHEK2O96017 543 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 CHRNGP07510 517 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 HOXD4P09016 255 aaPredicted RBP6.41□□□□□ -1.38
YBX3-206ENST00000536823 IFI6P09912 130 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 CT45A8P0DMV1 189 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 CT45A9P0DMV2 189 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 COX6B1P14854 86 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 SDC1P18827 310 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 TACR1P25103 407 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 ELAVL4P26378 380 aaKnown RBP6.41□□□□□ -1.38
YBX3-206ENST00000536823 ACVR2AP27037 513 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 CHRNB4P30926 498 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 MPIP34949 423 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 SERPINB5P36952 375 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 MC3RP41968 323 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 TRPC1P48995 793 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 CDK9P50750 372 aaKnown RBP6.41□□□□□ -1.38
YBX3-206ENST00000536823 NCBP2P52298 156 aaKnown RBP eCLIP6.41□□□□□ -1.38
YBX3-206ENST00000536823 NUP107P57740 925 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 PSPHP78330 225 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 MVKQ03426 396 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 C2orf80Q0P641 193 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 SNTA1Q13424 505 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 KIAA0040Q15053 153 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 GXYLT1Q4G148 440 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 CT45A2Q5DJT8 189 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 ARL13AQ5H913 290 aaPredicted RBP6.41□□□□□ -1.38
YBX3-206ENST00000536823 WLSQ5T9L3 541 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 KANK2Q63ZY3 851 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 TIGD3Q6B0B8 471 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 NPSR1Q6W5P4 371 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 B3GNT6Q6ZMB0 384 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 Q6ZSR9 355 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 NUP54Q7Z3B4 507 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 KIF18BQ86Y91 864 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 ULK2Q8IYT8 1036 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 LIX1Q8N485 282 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 ACBD4Q8NC06 268 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 NUP43Q8NFH3 380 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 OR7G2Q8NG99 324 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 OR2T11Q8NH01 316 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 TCP10LQ8TDR4 215 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 RNF138Q8WVD3 245 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 RND1Q92730 232 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 DVL3Q92997 716 aaPredicted RBP6.41□□□□□ -1.38
YBX3-206ENST00000536823 TMBIM1Q969X1 311 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 SLC35A4Q96G79 324 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 AMDHD1Q96NU7 426 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 COL21A1Q96P44 957 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 NODALQ96S42 347 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 TUBB1Q9H4B7 451 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 ANKRA2Q9H9E1 313 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 FOLH1BQ9HBA9 442 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 SENP1Q9P0U3 644 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 ACAD8Q9UKU7 415 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 EXO1Q9UQ84 846 aaKnown RBP6.41□□□□□ -1.38
YBX3-206ENST00000536823 RNF6Q9Y252 685 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 TMED5Q9Y3A6 229 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 FIS1Q9Y3D6 152 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 PCDHGB3Q9Y5G1 929 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 DOCK7Q96N67 2140 aa6.41□□□□□ -1.38
YBX3-206ENST00000536823 MAP1AP78559 2803 aaPredicted RBP6.4□□□□□ -1.38
YBX3-206ENST00000536823 C15orf38-AP3S2A0A0A6YYH1 394 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 FAM90A27PA6NNH2 459 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 TMEM233B4DJY2 109 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 C19orf84I3L1E1 186 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 PLOD2O00469 737 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 PIP5K1BO14986 540 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 LSM1O15116 133 aaKnown RBP6.4□□□□□ -1.38
YBX3-206ENST00000536823 TYROBPO43914 113 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 TSPAN2O60636 221 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 TBX19O60806 448 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 FZD7O75084 574 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 ICOSLGO75144 302 aa6.4□□□□□ -1.38
YBX3-206ENST00000536823 NME6O75414 186 aaPredicted RBP6.4□□□□□ -1.38
YBX3-206ENST00000536823 REM1O75628 298 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms