RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 FBXO9Q9UK97 447 aaPredicted RBP5.66□□□□□ -1.5
CCDC60-203ENST00000536742 COQ4Q9Y3A0 265 aa5.66□□□□□ -1.5
CCDC60-203ENST00000536742 MAGED1Q9Y5V3 778 aaPredicted RBP5.66□□□□□ -1.5
CCDC60-203ENST00000536742 LYVE1Q9Y5Y7 322 aa5.66□□□□□ -1.5
CCDC60-203ENST00000536742 A0A1W2PP18 115 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 SRPX2O60687 465 aaPredicted RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 CTSVO60911 334 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 MTX2O75431 263 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 CH25HO95992 272 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 CALCAP01258 141 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 PRB2P02812 416 aaPredicted RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 EIF2S1P05198 315 aaKnown RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 TPM1P09493 284 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 EPB41P11171 864 aaKnown RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 ZNF182P17025 639 aaPredicted RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 MCM3P25205 808 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 HNRNPH1P31943 449 aaKnown RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 PRKCIP41743 596 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 ARF3P61204 181 aaPredicted RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 PRAMEP78395 509 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 ARF1P84077 181 aaKnown RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 NIPAL4Q0D2K0 466 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 STK4Q13043 487 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 CCDC40Q4G0X9 1142 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 TYW3Q6IPR3 259 aaKnown RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 FAM122CQ6P4D5 195 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 BNIPLQ7Z465 357 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 NOXA1Q86UR1 476 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 PM20D2Q8IYS1 436 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 TMEM156Q8N614 296 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 TMEM251Q8N6I4 163 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 C11orf24Q96F05 449 aaPredicted RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 TXNDC15Q96J42 360 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 SPATA13Q96N96 652 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 ZNF285Q96NJ3 590 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 CYTH2Q99418 400 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 SELENOSQ9BQE4 189 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 CCM2Q9BSQ5 444 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 CNPY3Q9BT09 278 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 SUCNR1Q9BXA5 334 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 RAB11FIP5Q9BXF6 653 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 XPO4Q9C0E2 1151 aaKnown RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 LRRC19Q9H756 370 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 SYNCQ9H7C4 482 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 TRMT1Q9NXH9 659 aaKnown RBP5.65□□□□□ -1.5
CCDC60-203ENST00000536742 SPRR3Q9UBC9 169 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 PSAT1Q9Y617 370 aa5.65□□□□□ -1.5
CCDC60-203ENST00000536742 C1orf232A0A0U1RR37 186 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 ATP6AP2A0A1C7CYW4 349 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 GOLGA6L9A6NEM1 432 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 LIPT2A6NK58 231 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 HMGB1P1B2RPK0 211 aaPredicted RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 AKR1B15C9JRZ8 316 aaPredicted RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 HSPA12AO43301 675 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 NDUFS3O75489 264 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 ATP6AP2O75787 350 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 PPP1R3DO95685 299 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 ALPLP05186 524 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 MAOAP21397 527 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 PTPN6P29350 595 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 CASP1P29466 404 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 CD79BP40259 229 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 CDKN2AP42771 156 aaKnown RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 MTIF2P46199 727 aaKnown RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 THBS3P49746 956 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 STX17P56962 302 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 SEC61A1P61619 476 aaKnown RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 IL10RBQ08334 325 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 LRMPQ12912 555 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 NAE1Q13564 534 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 DPYSQ14117 519 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 GGTLC2Q14390 218 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 ADIPOQQ15848 244 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 GGNBP1Q5YKI7 109 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 SAMD14Q8IZD0 417 aaPredicted RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 CLIP4Q8N3C7 705 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 BBS5Q8N3I7 341 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 OR52E1Q8NGJ3 308 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 ZNF606Q8WXB4 792 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 RBM41Q96IZ5 413 aaKnown RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 ZNF599Q96NL3 588 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 FAM111AQ96PZ2 611 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 VPS35Q96QK1 796 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 LYSMD1Q96S90 227 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 SERINC2Q96SA4 455 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 LPAR4Q99677 370 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 FAM173AQ9BQD7 235 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 WACQ9BTA9 647 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 CALHM2Q9HA72 323 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 GRPEL1Q9HAV7 217 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 UGT1A8Q9HAW9 530 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 SCPEP1Q9HB40 452 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 ADAP2Q9NPF8 381 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 DEPPQ9NTK1 212 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 DDX28Q9NUL7 540 aaKnown RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 PDP1Q9P0J1 537 aaPredicted RBP5.64□□□□□ -1.51
CCDC60-203ENST00000536742 MKLN1Q9UL63 735 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 TRAF3IP3Q9Y228 551 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 CEPT1Q9Y6K0 416 aa5.64□□□□□ -1.51
CCDC60-203ENST00000536742 STAB2Q8WWQ8 2551 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms