RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 AHRRA9YTQ3 701 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 H0YC42 278 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 OIP5O43482 229 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 ACTL6AO96019 429 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 NGFRP08138 427 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 HK1P19367 917 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 MATN1P21941 496 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 S100A3P33764 101 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 ZFP36L2P47974 494 aaKnown RBP11.92□□□□□ -0.5
PRKDC-206ENST00000536429 TPD52P55327 224 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-206ENST00000536429 PPP2R2AP63151 447 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 TFF3Q07654 80 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.92□□□□□ -0.5
PRKDC-206ENST00000536429 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 ANXA8L1Q5VT79 327 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 EPGNQ6UW88 154 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 OR9I1Q8NGQ6 314 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 ASB5Q8WWX0 329 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 C1GALT1C1Q96EU7 318 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 SH3YL1Q96HL8 342 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-206ENST00000536429 SLC35G5Q96KT7 338 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 TRIB1Q96RU8 372 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 EBF4Q9BQW3 602 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-206ENST00000536429 SDHAF3Q9NRP4 125 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 AKAP9Q99996 3911 aa11.92□□□□□ -0.5
PRKDC-206ENST00000536429 NPIPB9F8W1W9 429 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 NDUFB5O43674 189 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 EPPINO95925 133 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 PGRP06401 933 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 HOXD4P09016 255 aaPredicted RBP11.91□□□□□ -0.5
PRKDC-206ENST00000536429 OR12D1P0DN82 309 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 CPN1P15169 458 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 UQCRC2P22695 453 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 PTGER4P35408 488 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 CLK3P49761 638 aaKnown RBP11.91□□□□□ -0.5
PRKDC-206ENST00000536429 IDH3AP50213 366 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 CLDN15P56746 228 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 CLDN18P56856 261 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 C17orf67Q0P5P2 114 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 NDUFAF6Q330K2 333 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 PDCD4Q53EL6 469 aaKnown RBP11.91□□□□□ -0.5
PRKDC-206ENST00000536429 RAET1LQ5VY80 246 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 NSUN5P2Q63ZY6 315 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 SAXO2Q658L1 398 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 TNFAIP8L2Q6P589 184 aaPredicted RBP11.91□□□□□ -0.5
PRKDC-206ENST00000536429 PM20D2Q8IYS1 436 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 GOLGA6L1Q8N7Z2 621 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 C9orf106Q8NAJ2 232 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 DYDC1Q8WWB3 177 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 RAB8BQ92930 207 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 CCDC115Q96NT0 180 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 SDF2Q99470 211 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 OR51I1Q9H343 314 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 UBQLN4Q9NRR5 601 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 SLC6A13Q9NSD5 602 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 INTS9Q9NV88 658 aaKnown RBP11.91□□□□□ -0.5
PRKDC-206ENST00000536429 BTNL2Q9UIR0 455 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 PCDHGB4Q9UN71 923 aa11.91□□□□□ -0.5
PRKDC-206ENST00000536429 MRPS18CQ9Y3D5 142 aaKnown RBP11.91□□□□□ -0.5
PRKDC-206ENST00000536429 KIAA1549Q9HCM3 1950 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 CSMD2Q7Z408 3487 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 OR2M5A3KFT3 312 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 PRAMEF27A3QJZ7 478 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 H0Y3Z8 333 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 SCDO00767 359 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 UBDO15205 165 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 HNRNPRO43390 633 aaKnown RBP11.9□□□□□ -0.5
PRKDC-206ENST00000536429 FCMRO60667 390 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 GSNP06396 782 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 KRT16P08779 473 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 IDO1P14902 403 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 ZNF708P17019 499 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 ATP6V1C1P21283 382 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 LCN1P31025 176 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 CEACAM8P31997 349 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-206ENST00000536429 AGFG1P52594 562 aaKnown RBP11.9□□□□□ -0.5
PRKDC-206ENST00000536429 SUCLG1P53597 346 aaKnown RBP11.9□□□□□ -0.5
PRKDC-206ENST00000536429 FUT5Q11128 374 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 DPY19L1Q2PZI1 675 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 FLYWCH1Q4VC44 716 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 KLHL26Q53HC5 615 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 AAGABQ6PD74 315 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 BHLHB9Q6PI77 547 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 POMZP3Q6PJE2 187 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 DNAJC14Q6Y2X3 702 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-206ENST00000536429 ADGRE4PQ86SQ3 457 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 ACBD4Q8NC06 268 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 RELL2Q8NC24 303 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-206ENST00000536429 CHDHQ8NE62 594 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-206ENST00000536429 VPS37AQ8NEZ2 397 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 GOT1L1Q8NHS2 421 aaPredicted RBP11.9□□□□□ -0.5
PRKDC-206ENST00000536429 CKAP2Q8WWK9 683 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 ZNF524Q96C55 264 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 NEURL3Q96EH8 262 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 OR52E6Q96RD3 313 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 SLC35A5Q9BS91 424 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 CHST11Q9NPF2 352 aa11.9□□□□□ -0.5
PRKDC-206ENST00000536429 SDR39U1Q9NRG7 319 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms