RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ENKURQ8TC29 256 aa14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 OR2A5Q96R48 311 aa14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 DCLRE1CQ96SD1 692 aaKnown RBP14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 FN3KQ9H479 309 aa14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 PIGUQ9H490 435 aa14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 MARCH7Q9H992 704 aa14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 IL20RAQ9UHF4 553 aa14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 DAPP1Q9UN19 280 aa14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 TRANK1O15050 2925 aa14.93□□□□□ -0.02
CHMP1A-202ENST00000535997 TRAPPC13A5PLN9 417 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 HPGDSO60760 199 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 TNFRSF4P43489 277 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 ADPRHP54922 357 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 ZNF791Q3KP31 576 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 GALNT12Q8IXK2 581 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 SLC7A6Q92536 515 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 ZC3HAV1LQ96H79 300 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 PRSS27Q9BQR3 290 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 ZNF624Q9P2J8 865 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 PCOLCE2Q9UKZ9 415 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 UNC119BA6NIH7 251 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 K7EQS6 105 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 SOCS6O14544 535 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 TNFSF14O43557 240 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 B3GALT2O43825 422 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 EML2O95834 649 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 CPMP14384 443 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 PAICSP22234 425 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 TCEA1P23193 301 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 HLA-DMAP28067 261 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 MRPS15P82914 257 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 KIR2DS3Q14952 304 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 DEFB134Q4QY38 66 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 TRIQKQ629K1 86 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 VASNQ6EMK4 673 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 KLBQ86Z14 1044 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 SIMC1Q8NDZ2 872 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 DUSP18Q8NEJ0 188 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 CD180Q99467 661 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 KCNN2Q9H2S1 579 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 OR52D1Q9H346 318 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 RBFOX1Q9NWB1 397 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 SIDT1Q9NXL6 827 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 BABAM2Q9NXR7 383 aa14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 C19orf53Q9UNZ5 99 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-202ENST00000535997 TTC36A6NLP5 189 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 STX11O75558 287 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 CSF2P04141 144 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 DBIP07108 87 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 BMP7P18075 431 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 ZNF10P21506 573 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 MLLT3P42568 568 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 SIM1P81133 766 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 RUNX2Q13950 521 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 QPRTQ15274 297 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 GPR68Q15743 365 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 MZT2BQ6NZ67 158 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 FBXO46Q6PJ61 603 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 PLET1Q6UQ28 207 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 TMEM91Q6ZNR0 172 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 MEPCEQ7L2J0 689 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 DGLUCYQ7Z3D6 616 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 OR4N5Q8IXE1 308 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 SIRT6Q8N6T7 355 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 OR51G2Q8NGK0 314 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 ASB12Q8WXK4 309 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 ACOT12Q8WYK0 555 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 OTULINQ96BN8 352 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 ZNF350Q9GZX5 532 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 MTIF3Q9H2K0 278 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 ADAM30Q9UKF2 790 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 SLC22A7Q9Y694 548 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 SHISA3A0PJX4 238 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 FAM183AA6NL82 134 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 NARSO43776 548 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 CA3P07451 260 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 ZGLP1P0C6A0 271 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 GDI1P31150 447 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 SEC13P55735 322 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 SNRPNP63162 240 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 TRMT12Q53H54 448 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 PLBD1Q6P4A8 553 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 ZNF619Q8N2I2 560 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 OR52L1Q8NGH7 329 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 FLVCR1-AS1Q8TAF5 88 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 HS6ST2Q96MM7 605 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 ZNF223Q9UK11 482 aaPredicted RBP14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 SATB2Q9UPW6 733 aa14.91□□□□□ -0.02
CHMP1A-202ENST00000535997 C2orf92A0A1B0GVN3 265 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 POM121BA6NF01 834 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 FMO6PO60774 539 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 SLC19A2O60779 497 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 RCBTB2O95199 551 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 PRKAR1AP10644 381 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 NID1P14543 1247 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 RPS4Y1P22090 263 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 MAP2K3P46734 347 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 KIAA1024LP59773 190 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 COL9A2Q14055 689 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 IL18Q14116 193 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms