RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	PGF	P49763	221 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TNFSF10	P50591	281 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	CDH11	P55287	796 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	NUP107	P57740	925 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	CACNG1	Q06432	222 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ODF4	Q2M2E3	257 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	IQCC	Q4KMZ1	466 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	MPPE1	Q53F39	396 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PDSS1	Q5T2R2	415 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	KCTD16	Q68DU8	428 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	CYB5R2	Q6BCY4	276 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PWWP2B	Q6NUJ5	590 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ALKBH5	Q6P6C2	394 aa	Known RBP	3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ADAMTSL5	Q6ZMM2	481 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	RTN4RL2	Q86UN3	420 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	C17orf82	Q86X59	251 aa	Predicted RBP	3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SFRP1	Q8N474	314 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	RYBP	Q8N488	228 aa	Predicted RBP	3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	DNAJC22	Q8N4W6	341 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	BANP	Q8N9N5	519 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	LMNTD1	Q8N9Z9	388 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	KIAA1524	Q8TCG1	905 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	WFDC5	Q8TCV5	224 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PATE1	Q8WXA2	126 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PCED1B	Q96HM7	432 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	LYZL4	Q96KX0	146 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	GDAP1L1	Q96MZ0	367 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PKP4	Q99569	1192 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	KRTAP4-11	Q9BYQ6	195 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ELOVL4	Q9GZR5	314 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SLC5A7	Q9GZV3	580 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	MIS12	Q9H081	205 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	LSG1	Q9H089	658 aa	Known RBP	3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SRD5A3	Q9H8P0	318 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PHPT1	Q9NRX4	125 aa	Predicted RBP	3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	COMMD8	Q9NX08	183 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	P4HTM	Q9NXG6	502 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	IL37	Q9NZH6	218 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	C2CD2	Q9Y426	696 aa		3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	YLPM1	P49750	1951 aa	Known RBP	3.91	□□□□□ -1.78
ECHDC1-223	ENST00000534442	MED12	Q93074	2177 aa		3.9	□□□□□ -1.78
ECHDC1-223	ENST00000534442	FAT4	Q6V0I7	4981 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442		A0A0A6YYC8	382 aa	Predicted RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442		A0A1W2PN81	502 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ARHGEF35	A5YM69	484 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ANKRD61	A6NGH8	418 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C2orf81	A6NN90	581 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PRSS46	E5RG02	174 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NPIPA5	E9PKD4	350 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C16orf97	H3BN30	126 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442		I3L1I5	382 aa	Predicted RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CCL24	O00175	119 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PRKN	O60260	465 aa	Predicted RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PRKRA	O75569	313 aa	Known RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PIGN	O95427	931 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IGHE	P01854	428 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C9	P02748	559 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SERPING1	P05155	500 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PRB4	P10163	310 aa	Predicted RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GCFC2	P16383	781 aa	Known RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	EPOR	P19235	508 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	LMO2	P25791	158 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CHRNA7	P36544	502 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SRP14	P37108	136 aa	Known RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CSK	P41240	450 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR3A1	P47881	315 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NR2C2	P49116	596 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HOXA1	P49639	335 aa	Predicted RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PEX3	P56589	373 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NME5	P56597	212 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	YBEY	P58557	167 aa	Predicted RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SRP54	P61011	504 aa	Known RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RPS21	P63220	83 aa	Known RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C2orf76	Q3KRA6	126 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF789	Q5FWF6	425 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR4A47	Q6IF82	309 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	WDR74	Q6RFH5	385 aa	Predicted RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FOXL2NB	Q6ZUU3	175 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SIAH3	Q8IW03	269 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR10G6	Q8NH81	332 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CCL4L1	Q8NHW4	92 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	LINC01560	Q8TB33	94 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PYCR2	Q96C36	320 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PDXP	Q96GD0	296 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	LMLN	Q96KR4	655 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF583	Q96ND8	569 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IP6K3	Q96PC2	410 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TNFRSF13C	Q96RJ3	184 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ATP6V0B	Q99437	205 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NDN	Q99608	321 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PSD2	Q9BQI7	771 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ACAT2	Q9BWD1	397 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NLN	Q9BYT8	704 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HIPK2	Q9H2X6	1198 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CUEDC2	Q9H467	287 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FBXO44	Q9H4M3	255 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TFB2M	Q9H5Q4	396 aa	Known RBP	3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ASB7	Q9H672	318 aa		3.9	□□□□□ -1.79
ECHDC1-223	ENST00000534442	POLD4	Q9HCU8	107 aa		3.9	□□□□□ -1.79

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