RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 OLFML2AQ68BL7 652 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 RAET1GQ6H3X3 334 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 CXorf57Q6NSI4 855 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 ULK3Q6PHR2 472 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 TBPL2Q6SJ96 375 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 GPAT4Q86UL3 456 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 CCDC71Q8IV32 467 aaPredicted RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 BAP18Q8IXM2 172 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 ARRDC1Q8N5I2 433 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 C10orf53Q8N6V4 93 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 PNLDC1Q8NA58 520 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 C3orf58Q8NDZ4 430 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 NLGN2Q8NFZ4 835 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 OR5D16Q8NGK9 328 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 TRMT10AQ8TBZ6 339 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 GPR152Q8TDT2 470 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 ZFPM2Q8WW38 1151 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 ALG8Q9BVK2 526 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 RERGLQ9H628 205 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 ERVMER34-1Q9H9K5 563 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 HHLA2Q9UM44 414 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 STRAPQ9Y3F4 350 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 IGLV3-16A0A075B6K0 115 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 PEX11BO96011 259 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 HBE1P02100 147 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 HNRNPA1P09651 372 aaKnown RBP eCLIP3.81□□□□□ -1.8
SOX6-217ENST00000533870 ELAVL4P26378 380 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 NKX2-5P52952 324 aaPredicted RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 RPS24P62847 133 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 PPP1R8Q12972 351 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 HSPB3Q12988 150 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 LEXMQ3ZCV2 418 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 ACSM3Q53FZ2 586 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 CATSPEREQ5SY80 951 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 TMEM200AQ86VY9 491 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 LURAP1LQ8IV03 231 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 ZNF561Q8N587 486 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 OR10Z1Q8NGY1 313 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 C3orf49Q96BT1 292 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 FYTTD1Q96QD9 318 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 CSF3RQ99062 836 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 SYT3Q9BQG1 590 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 INPP5KQ9BT40 448 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 RBCK1Q9BYM8 510 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 BRD7Q9NPI1 651 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 CMC2Q9NRP2 79 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 SACM1LQ9NTJ5 587 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 NOP16Q9Y3C1 178 aaKnown RBP3.81□□□□□ -1.8
SOX6-217ENST00000533870 PPIL1Q9Y3C6 166 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 HRH3Q9Y5N1 445 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 NUP188Q5SRE5 1749 aa3.81□□□□□ -1.8
SOX6-217ENST00000533870 EFCAB7A8K855 629 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 KHNYNO15037 678 aaKnown RBP3.8□□□□□ -1.8
SOX6-217ENST00000533870 AHSA1O95433 338 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 RAB3DO95716 219 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 LIMS3P0CW19 117 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 LIMS4P0CW20 117 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 RPA2P15927 270 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 CD34P28906 385 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 PRDX3P30048 256 aaKnown RBP3.8□□□□□ -1.8
SOX6-217ENST00000533870 HOXA9P31269 272 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 CD52P31358 61 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 MAP3K8P41279 467 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 GDF5P43026 501 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 PRLHRP49683 370 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 AGTR2P50052 363 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 MAP2K6P52564 334 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 GPR85P60893 370 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 IFITM3Q01628 133 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 MEF2AQ02078 507 aaPredicted RBP3.8□□□□□ -1.8
SOX6-217ENST00000533870 COL19A1Q14993 1142 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 ZMAT1Q5H9K5 638 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 ZNF613Q6PF04 617 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 TMEM220Q6QAJ8 160 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 SUSD1Q6UWL2 747 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 ACOT7LQ6ZUV0 252 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 CD163Q86VB7 1156 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 GLB1L2Q8IW92 636 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 KRTCAP2Q8N6L1 136 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 IGSF8Q969P0 613 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 ZNF582Q96NG8 517 aaPredicted RBP3.8□□□□□ -1.8
SOX6-217ENST00000533870 GAL3ST1Q99999 423 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 ZNF251Q9BRH9 671 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 MCOLN1Q9GZU1 580 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 MMP28Q9H239 520 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 ZDHHC6Q9H6R6 413 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 PLEKHA2Q9HB19 425 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 PLEKHA1Q9HB21 404 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 TREM1Q9NP99 234 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 DMRT3Q9NQL9 472 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 UFSP2Q9NUQ7 469 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 ZNF69Q9UC07 566 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 RASD1Q9Y272 281 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 POLR1DQ9Y2S0 133 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 TNRC6CQ9HCJ0 1690 aaKnown RBP3.8□□□□□ -1.8
SOX6-217ENST00000533870 ZBTB42B2RXF5 422 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 PPP6CO00743 305 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 MAGEB4O15481 346 aaPredicted RBP3.8□□□□□ -1.8
SOX6-217ENST00000533870 TSPAN3O60637 253 aa3.8□□□□□ -1.8
SOX6-217ENST00000533870 SLCO2B1O94956 709 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms