RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 BCL7CQ8WUZ0 217 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-236ENST00000533667 TMEM239Q8WW34 195 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 ACOT11Q8WXI4 607 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-236ENST00000533667 NANOS1Q8WY41 292 aaKnown RBP6.62□□□□□ -1.35
CTNND1-236ENST00000533667 LRRC46Q96FV0 321 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 SLC39A13Q96H72 371 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 TGM7Q96PF1 710 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 LPAR4Q99677 370 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 LMF2Q9BU23 707 aaKnown RBP6.62□□□□□ -1.35
CTNND1-236ENST00000533667 C1QTNF2Q9BXJ5 285 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 ZNF442Q9H7R0 627 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 C12orf10Q9HB07 376 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 THSD1Q9NS62 852 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 KCNIP1Q9NZI2 227 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 ADAM29Q9UKF5 820 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 KCNS2Q9ULS6 477 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 GABRQQ9UN88 632 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 CEPT1Q9Y6K0 416 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 CCDC88AQ3V6T2 1871 aa6.62□□□□□ -1.35
CTNND1-236ENST00000533667 HMX3A6NHT5 357 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 EFCAB7A8K855 629 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 F5H5P2 479 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 TOXO94900 526 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 TP53P04637 393 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 PTNP21246 168 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 CPOXP36551 454 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 WNT7BP56706 349 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 MLLT11Q13015 90 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ZNF169Q14929 603 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 RSU1Q15404 277 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ESCO2Q56NI9 601 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 DPY19L2P1Q6NXN4 242 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 METAP1DQ6UB28 335 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 NOXA1Q86UR1 476 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 IGFN1Q86VF2 1251 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 TPRA1Q86W33 373 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 BBS1Q8NFJ9 593 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 OR9Q2Q8NGE9 314 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 LILRB1Q8NHL6 650 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 NRG4Q8WWG1 115 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ARL11Q969Q4 196 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 SPTSSAQ969W0 71 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 TRMT2BQ96GJ1 504 aaKnown RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 SLC25A44Q96H78 314 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ATOH8Q96SQ7 321 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 CDCA3Q99618 268 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ABRACLQ9P1F3 81 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 NPIPB15A6NHN6 443 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 TO15178 435 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 TGM5O43548 720 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 RFPL3O75679 317 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ATE1O95260 518 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 PPP1R3DO95685 299 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 FCER2P06734 321 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 SLC10A3P09131 477 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 HNRNPA2B1P22626 353 aaKnown RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 HTR3AP46098 478 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 PTH2RP49190 550 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 HHEXQ03014 270 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 PPA1Q15181 289 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ZNF789Q5FWF6 425 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 AWAT2Q6E213 333 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 SFRP4Q6FHJ7 346 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 HTR3DQ70Z44 454 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 OR2T35Q8NGX2 323 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 FBXO27Q8NI29 283 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 NDNFQ8TB73 568 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ACPTQ9BZG2 426 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ACSS1Q9NUB1 689 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 PARPBPQ9NWS1 579 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 SLC7A7Q9UM01 511 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 USP3Q9Y6I4 520 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 RNF215Q9Y6U7 377 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 TRAV18A0A075B6X5 111 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 SYT7O43581 403 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ONECUT3O60422 494 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 AKAIN1P0CW23 69 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 CYBAP13498 195 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 CRHBPP24387 322 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 CD6P30203 668 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 PBX2P40425 430 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 LSSP48449 732 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 CAMLGP49069 296 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 PGGT1BP53609 377 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 FOXA1P55317 472 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 SLC26A5P58743 744 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 GPR85P60893 370 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ACY1Q03154 408 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 CAMK2DQ13557 499 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 GK2Q14410 553 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 GRIN2CQ14957 1233 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 MLC1Q15049 377 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 PTPRRQ15256 657 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 LRRTM3Q86VH5 581 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 METTL27Q8N6F8 245 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-236ENST00000533667 ARFGAP1Q8N6T3 406 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 LSMEM1Q8N8F7 131 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 B3GNT7Q8NFL0 401 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 OR5D16Q8NGK9 328 aa6.61□□□□□ -1.35
CTNND1-236ENST00000533667 SORCS1Q8WY21 1168 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms