RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TBXA2RP21731 343 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 SERPINB5P36952 375 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 HPCAL1P37235 193 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 CD79BP40259 229 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 KIR2DL2P43627 348 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 KCNJ5P48544 419 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 PRIM2P49643 509 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 TPD52P55327 224 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 CLDN20P56880 219 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 FAM27E3Q08E93 113 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 MLC1Q15049 377 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 PON3Q15166 354 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 UGT3A2Q3SY77 523 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF385BQ569K4 471 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 APOOLQ6UXV4 268 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 BTLAQ7Z6A9 289 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 TRABD2AQ86V40 505 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 MISPQ8IVT2 679 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 NATD1Q8N6N6 113 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 METTL25Q8N6Q8 603 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 SLC16A11Q8NCK7 471 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR4C3Q8NH37 302 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR2W6PQ8NHA6 318 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 FNDC9Q8TBE3 224 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 FAM110BQ8TC76 370 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 FIG4Q92562 907 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 GIMAP5Q96F15 307 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF845Q96IR2 970 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 PRPF18Q99633 342 aaKnown RBP11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 PRRG4Q9BZD6 226 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 ROPN1BQ9BZX4 212 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 RNF122Q9H9V4 155 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 ROPN1Q9HAT0 212 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 UBQLN4Q9NRR5 601 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 PAQR5Q9NXK6 330 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF226Q9NYT6 803 aa11.18□□□□□ -0.62
CAPRIN1-213ENST00000533562 SCDO00767 359 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 PIP5K1BO14986 540 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 GMFGO60234 142 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 LYPLA1O75608 230 aaPredicted RBP11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 KCNK2O95069 426 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ATE1O95260 518 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 OXSR1O95747 527 aaPredicted RBP11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 CHRNGP07510 517 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 CD8BP10966 210 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 POU2F1P14859 743 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF17P17021 662 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF41P51814 821 aaPredicted RBP11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 TMEM44Q2T9K0 475 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 DEFB113Q30KQ7 82 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ATP6AP1LQ52LC2 224 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 CPTPQ5TA50 214 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 MFSD12Q6NUT3 480 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 VWA1Q6PCB0 445 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 FIGNL1Q6PIW4 674 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 WDR75Q8IWA0 830 aaKnown RBP11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 COX18Q8N8Q8 333 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 TCP10LQ8TDR4 215 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ACTRT2Q8TDY3 377 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 JADE3Q92613 823 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZBTB8AQ96BR9 441 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 MECRQ9BV79 373 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 BTBD2Q9BX70 525 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ANKZF1Q9H8Y5 726 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 NEUROD4Q9HD90 331 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ATAD3AQ9NVI7 634 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 SLC17A7Q9P2U7 560 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 LGALS13Q9UHV8 139 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 ATP6V1HQ9UI12 483 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 VDAC3Q9Y277 283 aa11.17□□□□□ -0.62
CAPRIN1-213ENST00000533562 NUP214P35658 2090 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 ARID1AO14497 2285 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 A0A1W2PRB8 838 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 TMEM233B4DJY2 109 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 C16orf97H3BN30 126 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 EIF1AYO14602 144 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 SCAMP2O15127 329 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 PEX11AO75192 247 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 SPAG7O75391 227 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 SLU7O95391 586 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 PLGP00747 810 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 HMGN2P05204 90 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 ACP2P11117 423 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 UGT2B10P36537 528 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 EIF1AXP47813 144 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 SIRPAP78324 504 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 ADAM8P78325 824 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 POU6F2P78424 691 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 POU4F3Q15319 338 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 DUSP5Q16690 384 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 LSM12Q3MHD2 195 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 PPP4R4Q6NUP7 873 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF474Q6S9Z5 364 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 FAM214BQ7L5A3 538 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 GALNT10Q86SR1 603 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 GTPBP8Q8N3Z3 284 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 FBXO30Q8TB52 745 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 AGR3Q8TD06 166 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 FAM120BQ96EK7 910 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms