RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SDHAF3Q9NRP4 125 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 MED11Q9P086 117 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 ARMCX1Q9P291 453 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 LIPT1Q9Y234 373 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 WDR45Q9Y484 360 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 CAPN7Q9Y6W3 813 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 ESPL1Q14674 2120 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 SCDO00767 359 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 AQP7O14520 342 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 NDUFB5O43674 189 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 KIAA0513O60268 411 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 CCDC22O60826 627 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 CHRM4P08173 479 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 NUDT7P0C024 238 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 BMP2P12643 396 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 HPGDP15428 266 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 ABOP16442 354 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 PPIBP23284 216 aaKnown RBP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 SRD5A2P31213 254 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 PTGS2P35354 604 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 RNF144AP50876 292 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 DSTNP60981 165 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 CHRNEQ04844 493 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 SRSF1Q07955 248 aaKnown RBP eCLIP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 C17orf67Q0P5P2 114 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 FADDQ13158 208 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 GPR68Q15743 365 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 ZNF141Q15928 474 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 C3AR1Q16581 482 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 GPAT3Q53EU6 434 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 EIPR1Q53HC9 387 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 RUNDC3AQ59EK9 446 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 WIPI1Q5MNZ9 446 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 LRRC74BQ6ZQY2 392 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 PIGWQ7Z7B1 504 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 DHDDSQ86SQ9 333 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 YRDCQ86U90 279 aaKnown RBP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 SNX32Q86XE0 403 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 C10orf111Q8N326 155 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 ZNF527Q8NB42 609 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 ZG16BQ96DA0 208 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 CGREF1Q99674 301 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 CPPED1Q9BRF8 314 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 MYLK2Q9H1R3 596 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 SLC38A1Q9H2H9 487 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 IKZF5Q9H5V7 419 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 LDAHQ9H6V9 325 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 RUBCNLQ9H714 662 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 SPRR3Q9UBC9 169 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 MRPS18CQ9Y3D5 142 aaKnown RBP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 DTNAQ9Y4J8 743 aa10.9□□□□□ -0.66
SSBP3-214ENST00000533209 USP9XQ93008 2570 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-214ENST00000533209 ZGRF1Q86YA3 2104 aa10.9□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF407Q9C0G0 2248 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 LOC100653049A0A140TA62 436 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 CLEC18AA5D8T8 446 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 OR14I1A6ND48 311 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 OIP5O43482 229 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 ZIC3O60481 467 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 TNFRSF21O75509 655 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 UGT2B17O75795 530 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 KRT34O76011 436 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 TFPTP0C1Z6 253 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 NR2F1P10589 423 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 GPX2P18283 190 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 DPP4P27487 766 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 CA7P43166 264 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 DSCR4P56555 118 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-214ENST00000533209 HPCAP84074 193 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 NFYCQ13952 458 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 TOMM20Q15388 145 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 MAPRE2Q15555 327 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 MAPK14Q16539 360 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 COQ5Q5HYK3 327 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 EMC4Q5J8M3 183 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 PDZK1Q5T2W1 519 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 C1QL3Q5VWW1 255 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 REP15Q6BDI9 236 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 CLEC18BQ6UXF7 455 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 MTERF4Q7Z6M4 381 aaKnown RBP10.89□□□□□ -0.67
SSBP3-214ENST00000533209 TREML1Q86YW5 311 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 MISPQ8IVT2 679 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF619Q8N2I2 560 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF614Q8N883 585 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 CLEC18CQ8NCF0 446 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 FAM57AQ8TBR7 257 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 PHOSPHO1Q8TCT1 267 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 SLC38A5Q8WUX1 472 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 OIT3Q8WWZ8 545 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 RELTQ969Z4 430 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 ANKRD27Q96NW4 1050 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 KLHDC3Q9BQ90 382 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 CCDC106Q9BWC9 280 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 EXO5Q9H790 373 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 HHATLQ9HCP6 504 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 THUMPD1Q9NXG2 353 aaKnown RBP10.89□□□□□ -0.67
SSBP3-214ENST00000533209 TAS2R10Q9NYW0 307 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 P2RX2Q9UBL9 471 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms