RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 VENTXO95231 258 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 LUC7L3O95232 432 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SNAPINO95295 136 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 NSA2O95478 260 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 ANXA5P08758 320 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 GIG44P09565 113 aaPredicted RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 RAB40ALP0C0E4 278 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 STAG3L2P0CL84 134 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 MLNP12872 115 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 EPORP19235 508 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 EIF2S2P20042 333 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 NT5EP21589 574 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 AADACP22760 399 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 GIFP27352 417 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 HOXA9P31269 272 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SLC1A4P43007 532 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 ACADVLP49748 655 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 CRYBB1P53674 252 aaPredicted RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 AIF1P55008 147 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 MTTPP55157 894 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 ERVK-16P61578 105 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 HNRNPKP61978 463 aaKnown RBP eCLIP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 GLO1Q04760 184 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SNTB2Q13425 540 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SGCBQ16585 318 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 UPP1Q16831 310 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 KLHL38Q2WGJ6 581 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 HNRNPA1L2Q32P51 320 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 MPPE1Q53F39 396 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 PAGE2BQ5JRK9 111 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SPANXN2Q5MJ10 180 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 EOGTQ5NDL2 527 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 KRT39Q6A163 491 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SNRNP48Q6IEG0 339 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 PRR27Q6MZM9 219 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 RFWD3Q6PCD5 774 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 TMUB2Q71RG4 321 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 TRMT11Q7Z4G4 463 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 FAM228AQ86W67 206 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 PLCZ1Q86YW0 608 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 NUDCD3Q8IVD9 361 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 IQCKQ8N0W5 287 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 ARHGAP18Q8N392 663 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 GPR137CQ8N3F9 429 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF781Q8N8C0 355 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 ASCC1Q8N9N2 400 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 CCNYQ8ND76 341 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 OR7G3Q8NG95 312 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 OR4K1Q8NGD4 311 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 OR8K1Q8NGG5 319 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 OR10T2Q8NGX3 314 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 EXOC6Q8TAG9 804 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 PHOSPHO2Q8TCD6 241 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 RLN3Q8WXF3 142 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 MCUR1Q96AQ8 359 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 NXNL1Q96CM4 212 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 HAVCR1Q96D42 359 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 C12orf66Q96MD2 445 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SFXN2Q96NB2 322 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 KLHL5Q96PQ7 755 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 CHP1Q99653 195 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 GPA33Q99795 319 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF416Q9BWM5 594 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 TMEM245Q9H330 911 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 RGCCQ9H4X1 137 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 NEK6Q9HC98 313 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 C12orf4Q9NQ89 552 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 RBAKQ9NYW8 714 aaPredicted RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 PSMC3IPQ9P2W1 217 aaPredicted RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 POLKQ9UBT6 870 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 CTSFQ9UBX1 484 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 KCNN3Q9UGI6 736 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 STAP1Q9ULZ2 295 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 PPIL1Q9Y3C6 166 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 V9GYQ6 96 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 GON4LQ3T8J9 2241 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 IBTKQ9P2D0 1353 aaPredicted RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 UBE4BO95155 1302 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PTCH1Q13635 1447 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PPIP5K1Q6PFW1 1433 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 A0A0A6YYH2 397 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 IGKV6-21A0A0C4DH24 114 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 LOC105371267A0A1B0GV96 52 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 GSTTP1A0A1W2PQM5 241 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 EFCAB10A6NFE3 127 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 A6NJ64 397 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PCP4L1A6NKN8 68 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SMIM23A6NLE4 172 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PDZK1P1A8MUH7 402 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 MEI4A8MW99 385 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SUPT3HB4E1H0 165 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 TRIM77I1YAP6 450 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CLDN4O14493 209 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CALUO43852 315 aaPredicted RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 STX10O60499 249 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 DNAJB6O75190 326 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 PSIP1O75475 530 aaKnown RBP2.93□□□□□ -1.94
PTPRK-220ENST00000531466 CIAO1O76071 339 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 SEMA3DO95025 777 aa2.93□□□□□ -1.94
PTPRK-220ENST00000531466 LCA5LO95447 670 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms