RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 UGT1A10Q9HAW8 530 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 UGT1A8Q9HAW9 530 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 ZNHIT6Q9NWK9 470 aaKnown RBP6.15□□□□□ -1.42
CSDE1-213ENST00000530784 ADPRHL2Q9NX46 363 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 IL17CQ9P0M4 197 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 IFNKQ9P0W0 207 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 SLC24A2Q9UI40 661 aa6.15□□□□□ -1.42
CSDE1-213ENST00000530784 FARSAQ9Y285 508 aaKnown RBP6.15□□□□□ -1.42
CSDE1-213ENST00000530784 BSNQ9UPA5 3926 aa6.15□□□□□ -1.43
CSDE1-213ENST00000530784 ZNF106Q9H2Y7 1883 aaKnown RBP6.15□□□□□ -1.43
CSDE1-213ENST00000530784 SPTA1P02549 2419 aa6.15□□□□□ -1.43
CSDE1-213ENST00000530784 PTPN13Q12923 2485 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 MGAT4DA6NG13 374 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 GAPDHSO14556 408 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-213ENST00000530784 STX7O15400 261 aaKnown RBP6.14□□□□□ -1.43
CSDE1-213ENST00000530784 CST8O60676 142 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 DPM1O60762 260 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 RAB40ALP0C0E4 278 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 IGHV4-38-2P0DP08 117 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 RALBP11234 206 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 CYP2A7P20853 494 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 CDH3P22223 829 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 CBLP22681 906 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 CA5AP35218 305 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 CDKN2BP42772 138 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 KPNA2P52292 529 aaKnown RBP6.14□□□□□ -1.43
CSDE1-213ENST00000530784 ERVK11-1P61568 191 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 WASHC5Q12768 1159 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 BCL7AQ4VC05 210 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 PRR30Q53SZ7 412 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-213ENST00000530784 PID1Q7Z2X4 250 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 HPS6Q86YV9 775 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 ZNF567Q8N184 647 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 OR8K1Q8NGG5 319 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 OR2L2Q8NH16 312 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 P3H4Q92791 437 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 DCUN1D1Q96GG9 259 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 RMDN2Q96LZ7 410 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 DACH2Q96NX9 599 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 NLNQ9BYT8 704 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 SLC7A5P2Q9GIP4 190 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 DENND2DQ9H6A0 471 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-213ENST00000530784 PELI2Q9HAT8 420 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 NSMCE4AQ9NXX6 385 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 RSPH14Q9UHP6 348 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 POMT2Q9UKY4 750 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 BTRCQ9Y297 605 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 KCNK7Q9Y2U2 307 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 HYOU1Q9Y4L1 999 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.14□□□□□ -1.43
CSDE1-213ENST00000530784 COLEC10Q9Y6Z7 277 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 COL12A1Q99715 3063 aa6.14□□□□□ -1.43
CSDE1-213ENST00000530784 GSAPA4D1B5 854 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 SLC9B1P1A6NJY1 282 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 C2orf81A6NN90 581 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 AGAP14A8MT82 685 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 HMGB1P1B2RPK0 211 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-213ENST00000530784 TCP11X1B4DZS4 312 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 TMEM150CB9EJG8 249 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 C9J4A7 227 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 PSTPIP1O43586 416 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 CEACAM4O75871 244 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 SRP72O76094 671 aaKnown RBP6.13□□□□□ -1.43
CSDE1-213ENST00000530784 TPM1P09493 284 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 RORAP35398 523 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 PMP22Q01453 160 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 ABRQ12979 859 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 GAGE2BQ13066 116 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 PRKG2Q13237 762 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 PTPRCAPQ14761 206 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 NCF4Q15080 339 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 GAGE2EQ4V326 116 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 TFDP3Q5H9I0 405 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 GAGE2AQ6NT46 116 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 FAM198BQ6UWH4 519 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 RAB43Q86YS6 212 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 CCDC50Q8IVM0 306 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 CFAP206Q8IYR0 622 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 FDCSPQ8NFU4 85 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 OR4E2Q8NGC2 313 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 OR4K2Q8NGD2 314 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 OR1L3Q8NH93 324 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 NAT14Q8WUY8 206 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 LCN9Q8WX39 176 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 TMEM190Q8WZ59 177 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 PNPLA2Q96AD5 504 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 ULK4Q96C45 1275 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 HAUS1Q96CS2 278 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 SAT2Q96F10 170 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-213ENST00000530784 LINC00615Q96LM1 132 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-213ENST00000530784 CCDC42Q96M95 316 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 QKIQ96PU8 341 aaKnown RBP eCLIP6.13□□□□□ -1.43
CSDE1-213ENST00000530784 CCM2Q9BSQ5 444 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 FICDQ9BVA6 458 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 NUDT9Q9BW91 350 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 GFRA4Q9GZZ7 299 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 SRMSQ9H3Y6 488 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 SLA2Q9H6Q3 261 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 ASB8Q9H765 288 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms