RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CNPY1Q3B7I2 92 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 TMEM52BQ4KMG9 183 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 RABGAP1LQ5R372 815 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 ZYG11AQ6WRX3 759 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 HSD11B1LQ7Z5J1 315 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 ANKRD37Q7Z713 158 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 SLC47A2Q86VL8 602 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 ZCCHC7Q8N3Z6 543 aaKnown RBP3.56□□□□□ -1.84
C11orf88-204ENST00000529661 TBCKQ8TEA7 893 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 SPRYD4Q8WW59 207 aaPredicted RBP3.56□□□□□ -1.84
C11orf88-204ENST00000529661 TADA1Q96BN2 335 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 CNOT6LQ96LI5 555 aaKnown RBP3.56□□□□□ -1.84
C11orf88-204ENST00000529661 GSDMCQ9BYG8 508 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 NFKBIZQ9BYH8 718 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 MEAF6Q9HAF1 191 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 CYTH4Q9UIA0 394 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 NTNG1Q9Y2I2 539 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 MRPS7Q9Y2R9 242 aaKnown RBP3.56□□□□□ -1.84
C11orf88-204ENST00000529661 TMED5Q9Y3A6 229 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 FER1L5A0AVI2 2057 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 USP6P35125 1406 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 KIF16BQ96L93 1317 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 GSAPA4D1B5 854 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 ZNF487B1APH4 448 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 GPRIN2O60269 458 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 LCMT2O60294 686 aaKnown RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 SRPX2O60687 465 aaPredicted RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 TRIM3O75382 744 aaPredicted RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 IGFBP1P08833 259 aaPredicted RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 ANXA3P12429 323 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 PAX7P23759 505 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 GDI1P31150 447 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 RPL4P36578 427 aaKnown RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 DHPSP49366 369 aaPredicted RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 SPIBQ01892 262 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 GBE1Q04446 702 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 IL24Q13007 206 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 CAMK4Q16566 473 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 FILIP1LQ4L180 1135 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 CELF3Q5SZQ8 465 aaKnown RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 FAM120AOSQ5T036 256 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 SLX4IPQ5VYV7 408 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 BLOC1S2Q6QNY1 142 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 ZNF600Q6ZNG1 722 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 LRRC70Q7Z2Q7 622 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 ERICH1Q86X53 443 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 HIPK1Q86Z02 1210 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 POM121L12Q8N7R1 296 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 STEAP2Q8NFT2 490 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 OR6T1Q8NGN1 323 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 RFESDQ8TAC1 157 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 RAET1EQ8TD07 263 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 GIMAP1Q8WWP7 306 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 RLN3Q8WXF3 142 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 MYLPFQ96A32 169 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 SENP8Q96LD8 212 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 TTC25Q96NG3 672 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 ZSCAN5AQ9BUG6 496 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 PUS3Q9BZE2 481 aaKnown RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 POLR3FQ9H1D9 316 aaPredicted RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 GORASP2Q9H8Y8 452 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 IMPAD1Q9NX62 359 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 ELOVL2Q9NXB9 296 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 MRPL39Q9NYK5 338 aaKnown RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 ZNF581Q9P0T4 197 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 SENP1Q9P0U3 644 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 PTBP2Q9UKA9 531 aaKnown RBP3.55□□□□□ -1.84
C11orf88-204ENST00000529661 OR10H1Q9Y4A9 318 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 SPACA6W5XKT8 324 aa3.55□□□□□ -1.84
C11orf88-204ENST00000529661 XKRY2A2RUG3 117 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 CTAGE15A4D2H0 777 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ZSCAN5BA6NJL1 495 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 FAM74A7A6NL05 159 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 FAM220BPB1ANY3 271 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ZSCAN12O43309 604 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 BCAS1O75363 584 aaPredicted RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 SH3BGRLO75368 114 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 STX11O75558 287 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 NEBLO76041 1014 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 RHOBTB1O94844 696 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 KIAA0754O94854 1291 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ADCY5O95622 1261 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 HBQ1P09105 142 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 GZMAP12544 262 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 CPN1P15169 458 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 RPA2P15927 270 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 SDC1P18827 310 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 TPSB2P20231 275 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 PTGER3P43115 390 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ATP5OP48047 213 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ALDH3B2P48448 385 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 RGS4P49798 205 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 NOVA1P51513 510 aaKnown RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 NTHL1P78549 312 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 PLOD1Q02809 727 aaPredicted RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 CSTF1Q05048 431 aaKnown RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 PJVKQ0ZLH3 352 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 IFT88Q13099 833 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 IL18R1Q13478 541 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 CUL2Q13617 745 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms