RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 IGLV3-21P80748 117 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 PCDH1Q08174 1060 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 FOXF2Q12947 444 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 DOC2AQ14183 400 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 LIPJQ5W064 366 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 TRIM40Q6P9F5 258 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 CYP20A1Q6UW02 462 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 ACOT4Q8N9L9 421 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 SNX31Q8N9S9 440 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 OR5L2Q8NGL0 311 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 NUBPLQ8TB37 319 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 SPACA9Q96E40 222 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 SENP5Q96HI0 755 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 METTL2AQ96IZ6 378 aaKnown RBP7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 JSRP1Q96MG2 331 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 MS4A8Q9BY19 250 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 PRDM14Q9GZV8 571 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 Q9H521 79 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 NT5DC2Q9H857 520 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 LRTM1Q9HBL6 345 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 ARMC1Q9NVT9 282 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 C1orf109Q9NX04 203 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 JKAMPQ9P055 326 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 ZNF629Q9UEG4 869 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 RIMS3Q9UJD0 308 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 MRPS33Q9Y291 106 aaKnown RBP7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 SLC6A5Q9Y345 797 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 TMED5Q9Y3A6 229 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 RNF11Q9Y3C5 154 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 PCDHGB3Q9Y5G1 929 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 PCDHA9Q9Y5H5 950 aa7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 RAI1Q7Z5J4 1906 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-208ENST00000529608 CUBNO60494 3623 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 ANKDD1BA6NHY2 528 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 CLCA1A8K7I4 914 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 FXYD1O00168 92 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 SAP18O00422 153 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 NME4O00746 187 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 ANKRD28O15084 1053 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 SEC22BO75396 215 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 RSL1D1O76021 490 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 IL6P05231 212 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 GPIP06744 558 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 UMPSP11172 480 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 G6PDP11413 515 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 UQCRBP14927 111 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 GDF1P27539 372 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 MSX2P35548 267 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 TIMP3P35625 211 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 STT3AP46977 705 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 MED21Q13503 144 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 GRAMD1BQ3KR37 738 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 RFTN2Q52LD8 501 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 LPCAT4Q643R3 524 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 C18orf63Q68DL7 685 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 LCN8Q6JVE9 175 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 C9orf106Q8NAJ2 232 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 SELENOMQ8WWX9 145 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 EDARADDQ8WWZ3 215 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 POP5Q969H6 163 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 NTNG2Q96CW9 530 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 WDR34Q96EX3 536 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 CMTM7Q96FZ5 175 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 WDYHV1Q96HA8 205 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 SH3GL1Q99961 368 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 C1orf50Q9BV19 199 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 DPY30Q9C005 99 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 PCDHAC1Q9H158 963 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 UBQLN3Q9H347 655 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 ELOVL6Q9H5J4 265 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 COPS7BQ9H9Q2 264 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 LYRM4Q9HD34 91 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 NEUROD4Q9HD90 331 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 CMTM6Q9NX76 183 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 SCOCQ9UIL1 159 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 RAB26Q9ULW5 256 aa7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 FBN1P35555 2871 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-208ENST00000529608 MED12Q93074 2177 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 MBD3L4A6NDZ8 208 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 MBD3L3A6NE82 208 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 A6NHS1 94 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 MBD3L5A6NJ08 208 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 AHRRA9YTQ3 701 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 FAM47E-STBD1D6RA91 191 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 CLGNO14967 610 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 DENRO43583 198 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 SCELO95171 688 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 KCNH1O95259 989 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 TGFB1P01137 390 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 HPNP05981 417 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 FCGR1AP12314 374 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 HSD3B1P14060 373 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 BMP7P18075 431 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 HIST1H1TP22492 207 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 CPN2P22792 545 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 HSD3B2P26439 372 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 PEX2P28328 305 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 PCSK6P29122 969 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 IL12AP29459 219 aa7.77□□□□□ -1.17
TGFBR3-208ENST00000529608 PEX19P40855 299 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms